Gene detail

Detailed information of FUN_046711-T1 in Siderastrea siderea

Genomic Location: contig_65:1267097...1287354
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_046711-T1

ATGAAAAGAAGCACAAAGATCTCTACTTCGAATCAAGTGCTTCAGTTAAACACTAGCCAATATCGCAGGGAGTACAAAAGCGGGGCTGTTTATCATGGCGAACTTGAAGGAACAAAAAAGAGCGGGAACGGGATTTTTAAATGGCCTAATGGCGCCTGTTATGATGGTGAATATGTTGACAATACTAGGCACGGTAATGGCAAACAATACTGGCCGGACGGTTCGATTTATAACGGTGCTTTGGTGAGGGACTTGAGACACGGTGTCGGAACTCTCACCTGGCCGGATGGAGAGAGTTACAGTGGAGAGTTTTATCGTGATAGAAAACATGGTAAAGGAGTTTACACCTGGCCAGATGGTACAAAATTTGCAGGCCACTTTGAGAATGATAAGAAAGAAGGCTTTGGAACGTTCACTTTCCCAAGTGGTAACAAATTTGAGGGAATATACAGAAGAGATGAAAGAGATGGCCCTGGGATAATGACTTATGCTAACAATGTAAAAGACGTTGGTCTCTGGTCTGGTGAACGTCTTATCAAACTCTGCTCAGTCATGGACAGTGCATTCCTCTTTCAGCACTACTCTAATTACAACGTGAATGCAGGAAACAATTTATCAGGGAAAGTGAGACGAGCTAATACTGCAAAGGAGAATGTTAGAAACTCAACACCTTCCTTACAAGACTTTGAAAGATTTGACAACAGTAAACTGTTGTCTCAGATTCCAAGTTCCTTTTCATACTCTGACATTTTAGAAGGCATTCGTGGTGATAAGGGACCAAAGGGACCTGTTGAGCAGGCCTCAGAAGAACTTTTGAGAGCGTCAGCTGCAGGCGACTGCATTAAAGTCAGGAGTTTGATTGAAACTGGAAAGGTACATGTGGATGTCGCAGATAAAACAGGATACACTGCACTGCTAGCTGCTTCAGTAAATTGTCACCGAGATGTCATCAATTGTCTGCTGGACAATGGTGCCAATGTGAACAAGTTAAATGATGAGGGATTGTCAGTTCTTGCTGCCTGCCATGTCCTTTTCTACACTAAACACACTTGGAAGGACAACATTGCTGAAAACATACCCAATGAAAACTTGTTCAATTGTATTCAGGAAGATCGACAAAAAGGAACGCACATTCATCGGAATTATCGTCAAGGTGTTGTACTTGATGATGCCAGGTTGGGAGCAAATGCTGACTCTGGAGAAAATGAGGAAAATTCCGAAGATGAGTTTGTAGAGAATTGCACTCAAAGAGAGCACAATCAAGGCGAATCCAGTGATCAAAGAACAtataaaattattgaatttaCTGACAGAAGGTTTGGCGATAAGGATGAGAACCTTGAAGAATTAGAAACCAATTTAAATAATAGTATGAAAAGTAAACTAGATTTAAATAAAAATGGTTTTATGAAGAGCGTTGACGACAAAGACACAAAAAGAACAATTGATCAAGGGGTTGAAAATCAGCTGGACTCTGATATGCTGACACCAATCAGTTTACATGAAAAAATTGCCGATAAAACTGGCAAACAAAGTATAATGGATGCATCTTTGTTTAGTATAATGAGTGTTGACAGCACAAGACAGCCATCAGACTCATGTGATGACAATCATAGTGAAAACAGCATGGAACAAAATAAGCAAGTGCTGCTGGCTTTTCAAAGaCGTCCTCATCTTGAAGCAACAGTTCGTCTGTTGCTTAAACGAGGTGCAGACCCTAATGCCTCATCTCTTCCAATGCCTGTCCTGTTCTTTGCTGTCAAAGCTGCTGATACTGCTGCAGTGGAGATTTTACTTCAGAAAGGTGCTGACACTTCAGCTAAGTTATCAAAGGAGcaatCAGGGATTGCACCTCTTCATATTGCTGTGGCTCTGCCAGATGAAACAGGTGTTGAGATCACAGAGCTGCTTCTGAAGTCAGGAGCTGACCCTGACATAAGAGACAGTGCGTTTGGTTCAGAGGAGAATGGAAGGACTCCAGCACACATAGCATGTTCAAGAGAGGATAATGACAAGGTATCATGTGCTGTAGTGAGACTGTTGCTGGAATATGGAGCCAATCCTGACCTGTTGTGTGAAGGACACTCTGCTCTTTCCTTGGCAATCTGCAGTGGAAATGATCTGGCTGTAGACACTCTTCTGGAGCATGGAGCTAATCCTAGCCTTCGCCTTTCCAAGGGGGTAGGGTCCGCACTTTGTGCTGCTACATCATTCATGGCAGAAAGGAGAAGGACTCCAGCAGGAAGAATAAAACTTATTAACAAGTTAATGAGAGCCGGAGCCAACATCCTCTCTCCAATAACAGTGAACCTCAAGTATCCCCCTGGCACTGTTGTGGATTATGCTTACAATGTGTTTTATCAGgATCGCAAGATAGCCCACACTCCTTATCATGCCCTCACGGTGACAGAGCGTGAGTGTTACAATGCACGACGGGAAATGTTGGATCATCTGGGAGATTTGCTGCGAACACAGGTGttgaagaaagagaaagaactGATTAAGAAACAGATTGAGGAGGCTGAAAAACAAGCTGAATCACGGAAACCCGATGAAACCCCTCAGTCAGCCTGGGGTATTCTCAAATCACCCGACAAGGTCAACAAACTAAGAGAACACGACCCTACCCCTGCTGGGAGAAATTATGACTTCACCCCTGCTGAAAAAACTGATGTCATGAGGTACAGCCGCGTTAGCTTCAGACTTGATAATGAGGTTTTTGGAGGAGACGAAATCGAGGCTGAAGCAGATCGTGAAGTCGAGGCTGTCACTGGAACTGGCGGAGAGAGCCCTGGCGCTGATGATGAGGAAGTAAAAGCGGATATGACGTCAGAACCGGCCGAGGCCAGCAAAGAAAGTACTCCATGTTCTCTTGGGTCCAGTCCTCCTGATCTGCCGTCTGCCAAACCCTCGTCTCCAGGTCGAGACGAACACTGTGGACTACGCATTGCCGTGACCAAAGCCACTGACCACATGAGTATCTCAGCACTGGCGACTCAAGCTTTGAAACAGCGGCAACAAGTGCTGAAAAACCGCTTCCGGTACTGTTACGAGTGCGGGCGCTCGATTGCAATTCGCTTATCTGCATGCACGAGATGCAAAGAGGTGTTTTATTGCAGTAAGTCGTGCAAACTGAAGGCTTGGAATGCGAGGCATAGGGAAGAATGTGTCAGGTTGACAGGTGGAGTAAAGACAGCTTCAAGTCGCCGAGCAGATAGCCCGACTCCAACCACGGATCCCGATGGCCCTCCCCCGTCTACCACCCCCACAGGCTCCCAAAGAAAGACGCCTTCTCGGGGGAGGGGTGAGAAGGGACGTAAAGCACCGACGCCTTCGCGAGCATCCAAGCGGAGTGCTTCGTCATCGGCCACGAAAATTAAGAAATAA

Transcript

FUN_046711-T1

TTTGCAGCCATTGAATGCAAAACGTAGCAGATGATATGATCATGAGCAGTCAATGTTTTGAAGTACTGAAGTTTAAAATCTGGATTGAGGGGAATTTGTATCCCATCAAAGGCTTAAGTTGTTGTTGAGAAGGCTTACTGTGAGCTTGTTATGAGGCATGAAAAGAAGCACAAAGATCTCTACTTCGAATCAAGTGCTTCAGTTAAACACTAGCCAATATCGCAGGGAGTACAAAAGCGGGGCTGTTTATCATGGCGAACTTGAAGGAACAAAAAAGAGCGGGAACGGGATTTTTAAATGGCCTAATGGCGCCTGTTATGATGGTGAATATGTTGACAATACTAGGCACGGTAATGGCAAACAATACTGGCCGGACGGTTCGATTTATAACGGTGCTTTGGTGAGGGACTTGAGACACGGTGTCGGAACTCTCACCTGGCCGGATGGAGAGAGTTACAGTGGAGAGTTTTATCGTGATAGAAAACATGGTAAAGGAGTTTACACCTGGCCAGATGGTACAAAATTTGCAGGCCACTTTGAGAATGATAAGAAAGAAGGCTTTGGAACGTTCACTTTCCCAAGTGGTAACAAATTTGAGGGAATATACAGAAGAGATGAAAGAGATGGCCCTGGGATAATGACTTATGCTAACAATGTAAAAGACGTTGGTCTCTGGTCTGGTGAACGTCTTATCAAACTCTGCTCAGTCATGGACAGTGCATTCCTCTTTCAGCACTACTCTAATTACAACGTGAATGCAGGAAACAATTTATCAGGGAAAGTGAGACGAGCTAATACTGCAAAGGAGAATGTTAGAAACTCAACACCTTCCTTACAAGACTTTGAAAGATTTGACAACAGTAAACTGTTGTCTCAGATTCCAAGTTCCTTTTCATACTCTGACATTTTAGAAGGCATTCGTGGTGATAAGGGACCAAAGGGACCTGTTGAGCAGGCCTCAGAAGAACTTTTGAGAGCGTCAGCTGCAGGCGACTGCATTAAAGTCAGGAGTTTGATTGAAACTGGAAAGGTACATGTGGATGTCGCAGATAAAACAGGATACACTGCACTGCTAGCTGCTTCAGTAAATTGTCACCGAGATGTCATCAATTGTCTGCTGGACAATGGTGCCAATGTGAACAAGTTAAATGATGAGGGATTGTCAGTTCTTGCTGCCTGCCATGTCCTTTTCTACACTAAACACACTTGGAAGGACAACATTGCTGAAAACATACCCAATGAAAACTTGTTCAATTGTATTCAGGAAGATCGACAAAAAGGAACGCACATTCATCGGAATTATCGTCAAGGTGTTGTACTTGATGATGCCAGGTTGGGAGCAAATGCTGACTCTGGAGAAAATGAGGAAAATTCCGAAGATGAGTTTGTAGAGAATTGCACTCAAAGAGAGCACAATCAAGGCGAATCCAGTGATCAAAGAACAtataaaattattgaatttaCTGACAGAAGGTTTGGCGATAAGGATGAGAACCTTGAAGAATTAGAAACCAATTTAAATAATAGTATGAAAAGTAAACTAGATTTAAATAAAAATGGTTTTATGAAGAGCGTTGACGACAAAGACACAAAAAGAACAATTGATCAAGGGGTTGAAAATCAGCTGGACTCTGATATGCTGACACCAATCAGTTTACATGAAAAAATTGCCGATAAAACTGGCAAACAAAGTATAATGGATGCATCTTTGTTTAGTATAATGAGTGTTGACAGCACAAGACAGCCATCAGACTCATGTGATGACAATCATAGTGAAAACAGCATGGAACAAAATAAGCAAGTGCTGCTGGCTTTTCAAAGaCGTCCTCATCTTGAAGCAACAGTTCGTCTGTTGCTTAAACGAGGTGCAGACCCTAATGCCTCATCTCTTCCAATGCCTGTCCTGTTCTTTGCTGTCAAAGCTGCTGATACTGCTGCAGTGGAGATTTTACTTCAGAAAGGTGCTGACACTTCAGCTAAGTTATCAAAGGAGcaatCAGGGATTGCACCTCTTCATATTGCTGTGGCTCTGCCAGATGAAACAGGTGTTGAGATCACAGAGCTGCTTCTGAAGTCAGGAGCTGACCCTGACATAAGAGACAGTGCGTTTGGTTCAGAGGAGAATGGAAGGACTCCAGCACACATAGCATGTTCAAGAGAGGATAATGACAAGGTATCATGTGCTGTAGTGAGACTGTTGCTGGAATATGGAGCCAATCCTGACCTGTTGTGTGAAGGACACTCTGCTCTTTCCTTGGCAATCTGCAGTGGAAATGATCTGGCTGTAGACACTCTTCTGGAGCATGGAGCTAATCCTAGCCTTCGCCTTTCCAAGGGGGTAGGGTCCGCACTTTGTGCTGCTACATCATTCATGGCAGAAAGGAGAAGGACTCCAGCAGGAAGAATAAAACTTATTAACAAGTTAATGAGAGCCGGAGCCAACATCCTCTCTCCAATAACAGTGAACCTCAAGTATCCCCCTGGCACTGTTGTGGATTATGCTTACAATGTGTTTTATCAGgATCGCAAGATAGCCCACACTCCTTATCATGCCCTCACGGTGACAGAGCGTGAGTGTTACAATGCACGACGGGAAATGTTGGATCATCTGGGAGATTTGCTGCGAACACAGGTGttgaagaaagagaaagaactGATTAAGAAACAGATTGAGGAGGCTGAAAAACAAGCTGAATCACGGAAACCCGATGAAACCCCTCAGTCAGCCTGGGGTATTCTCAAATCACCCGACAAGGTCAACAAACTAAGAGAACACGACCCTACCCCTGCTGGGAGAAATTATGACTTCACCCCTGCTGAAAAAACTGATGTCATGAGGTACAGCCGCGTTAGCTTCAGACTTGATAATGAGGTTTTTGGAGGAGACGAAATCGAGGCTGAAGCAGATCGTGAAGTCGAGGCTGTCACTGGAACTGGCGGAGAGAGCCCTGGCGCTGATGATGAGGAAGTAAAAGCGGATATGACGTCAGAACCGGCCGAGGCCAGCAAAGAAAGTACTCCATGTTCTCTTGGGTCCAGTCCTCCTGATCTGCCGTCTGCCAAACCCTCGTCTCCAGGTCGAGACGAACACTGTGGACTACGCATTGCCGTGACCAAAGCCACTGACCACATGAGTATCTCAGCACTGGCGACTCAAGCTTTGAAACAGCGGCAACAAGTGCTGAAAAACCGCTTCCGGTACTGTTACGAGTGCGGGCGCTCGATTGCAATTCGCTTATCTGCATGCACGAGATGCAAAGAGGTGTTTTATTGCAGTAAGTCGTGCAAACTGAAGGCTTGGAATGCGAGGCATAGGGAAGAATGTGTCAGGTTGACAGGTGGAGTAAAGACAGCTTCAAGTCGCCGAGCAGATAGCCCGACTCCAACCACGGATCCCGATGGCCCTCCCCCGTCTACCACCCCCACAGGCTCCCAAAGAAAGACGCCTTCTCGGGGGAGGGGTGAGAAGGGACGTAAAGCACCGACGCCTTCGCGAGCATCCAAGCGGAGTGCTTCGTCATCGGCCACGAAAATTAAGAAATAAAAGCAACGCCGGAATGTTGAAAAAACAGAACAATCCAGAACAATCCTGGGGCTCGCGATGAGCTGCTACTGAACATAGACCGCAACCACTCGAAACCCAAGAAAGTTTTATTAACAGAATGCACACATTTGTGCATGAATAAAAACAGATTTCTCGGAGGCCTAAAAGAACAGACGTTTCCCAGGCACAGAACTTTCTCCTCTTCTCCCCTGCAAATGTGCCTGGATAACAACAGAGAACATGTGCAATTTACAGCTAATGATATACTACTCAGACCAGAGTTGTATTACGACATCGATATGGAATGTGCAGTTTCGTTACGCAAACTTCTTAGCGAGAGAACAGTGTGTTTGCGAATTCTATTatagtgttgttttttttcctttaccTGGTTTAGTGAAGGCTGGCCTTTCTAGTTTTTCTTAATTTCGTCGATCAGCTTTCTCATAGTTTCTCATAATTGTCAGAGGTTAGTTTTTCTTCTGTAAAAAAACCCCGTTAAGACAACGAGACGCGAGGCTTGGCCAGTTTAGACTGCTTCTTAGTAGCCTACATGAAGTCAACAGGAGACAACTTCCCCCGATGGGAGGACTTCCATCTTAAGGGAGCGGGAACGCTGTCCTTTGTTTTAGGGGTGTAAACTGTGTTAAGGTGCTAAACACAGTTCACACCCTAAACACAATGACCTCCCACATCCCCTTGTGTTGGCTGGATTCTTTGAGGTGCCATCATTAAAAGGTGGAGCAAAATCTCTAAAGGGTACAAAACTCCCTGTTCTCTCGGTACTTTTGTGCTCTCCACAGACTTTCCTTTCATATTCTCGGCTCTTGAATTGAAGCTCAAAGATAGAGAAAACCAGCCGTATGGGTGTACTGTATTTGTGGTTTGATTATTTAAAACAGGTATtgttttatatttacatgtaagaTAGCAACCCATTTGTGACGTGATTATTTACgaggaaataaaattattttgcttATAAATTGTTTCACTGGTTCTTGATAATGATAGGCTTTTTATATCCCTCTGGATCATGACATGCAGAGTAATATTTCATTGTTCTTACTGATTTTGCACATTGTGCTCAGGTGTGTGCTGAAATTCTTTATCTTTTTAGTCTTTTCCGAGCCAGATTTAGATTATTTTCAAACAGACAGAATGACGGGAAAACGGAGACACCAGTACTAATTACTAAACCTGAGATCAGGCTCACGCAACTCGGCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01753 all species →	zf-MYND	MYND finger	Domain	Interproscan
PF02493 all species →	MORN	MORN repeat	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002893 all species →	Domain	Zinc finger, MYND-type	Interproscan
IPR053064 all species →	Family	Ankyrin repeat and MYND domain-containing protein	Interproscan
IPR003409 all species →	Repeat	MORN repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15897 all species →	ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24631	ANKMY1, ZMYD13; ankyrin repeat and MYND domain-containing protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_046711-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

76TPM > 0

7Conditions

401.4Max TPM

162.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	18	181.54	401.37
holobiont · low.pH Control.temp	20	18	161.05	334.11
holobiont · control.pH_high.temp	20	17	151.25	285.85
holobiont · control.pH Control.temp	19	17	199.88	337.80
Whole organism	4	4	22.70	26.31
unannotated	1	1	12.15	12.15
live coral tissue/skeleton	1	1	16.04	16.04

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	401.37
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	308.22
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	302.94
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	296.53
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	254.75
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	242.18
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	237.98
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	225.79
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	221.07
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	185.48
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	179.66
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	171.02
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	154.06
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	150.37
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	137.86
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	81.39
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	55.60
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	24.52
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	334.11
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	329.17
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	269.31
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	262.49
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	220.09
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	216.42
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	194.37
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	185.96
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	156.65
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	144.48
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	143.95
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	130.40
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	114.68
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	113.90
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	111.91
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	106.27
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	105.41
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	81.36
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	285.85
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	271.45
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	246.59
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	239.17
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	201.34
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	196.85
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	196.25
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	193.90
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	174.67
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	174.44
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	169.37
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	137.52
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	133.88
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	130.33
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	112.42
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	82.08
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	78.97
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	337.80
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	295.97
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	295.63
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	292.55
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	292.29
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	259.89
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	257.67
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	251.92
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	246.72
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	226.54
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	205.38
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	183.27
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	169.48
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	144.06
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	142.36
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	139.55
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	56.71
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	26.31
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	24.36
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	23.71
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	16.40
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	12.15
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	16.04

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.