Genomic Location: contig_66:3410103...3429776
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families
| CDS |
| FUN_047239-T1 |
| Transcript |
| FUN_047239-T1 |
| Protein |
| FUN_047239-T1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | ULD|UFD|PB1 · all ubiquitin genes in this species |
| Ubiquitin family | UBD|Alpha-Helix|UBA · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00569 all species → | ZZ | Zinc finger, ZZ type | Domain | Interproscan |
| PF16158 all species → | N_BRCA1_IG | Ig-like domain from next to BRCA1 gene | Domain | Interproscan |
| PF00564 all species → | PB1 | PB1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000270 all species → | Domain | PB1 domain | Interproscan |
| IPR000433 all species → | Domain | Zinc finger, ZZ-type | Interproscan |
| IPR043145 all species → | Homologous_superfamily | Zinc finger, ZZ-type superfamily | Interproscan |
| IPR009060 all species → | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR032350 all species → | Domain | Next to BRCA1, central domain | Interproscan |
| IPR015940 all species → | Domain | Ubiquitin-associated domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20930 all species → | OVARIAN CARCINOMA ANTIGEN CA125-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17987 | NBR1; next to BRCA1 gene 1 protein | - | Mitochondrial biogenesis | ko03029 | deepkoala |
