Gene detail

Detailed information of FUN_047709-T2 in Siderastrea siderea

Genomic Location: contig_68:243692...350277
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_047709-T2

ATGTTTGTGACACGAGGCACTGTTCGCCTAATTGTCGCTGCCCTGTGTTGCAAAGTACTTTTCCTTAACCAAAACTTCGTGGATAGCCATCCTCAATGCTTGGATTTTAGGGCCCCCTTTCAAGTGGCTGCAGGGTTATCATTTTGCTCACAAAACTACTCCGACTATGGCTGCTGTACGTCAAAACGCGATCAAGAAATCGCAAAGATGGCTAAAAATTTGGCTGAGCGATTTTCTCTGAACACCAGACCGAAATGCGCTAAAATGGTGAAAAACATTCTTTGCCTTGAATGCCACAAATACGCTGCTCACATTTTTGCAGCAGAAGGGAACGAGGACTTTGATTCAACAACAGCAGCTCCGGGATTATGCAATGGCTTCTGTAAAGGTTTTTACCGCGATTGTAACGACGTAGCGTCGGTGCTTCCTCTACTAGCCAAATGGAAGCTTAGAGCGAGTTCTCTGAACTCAACATCCTCAAAGACCACATCTGATCCTTTGTCGGAGAAAGCACTCTGTGATGGACTGAAGCTACCAGACACAGATTACTGTTATCCAAATGTGGAAACAGTCGATCAGAATATTCTTGCCCAAAAATATAACTACGATTCCAACGAAGGCTGTTTGTGCGTGGAAGAGCTCGCGTGTGGGCTCCGCAATCCTCTGGCTGCCGTCCACGCAGGGGATGGCTCAGAGCGATTGTTTGTGGCTGAACAGCACGGTGTAATCCGCATCATAACAGCCTCGGGAAAACTGTTACAGCAGCCATTTTTGGACATCACTGACCGCGTCCTGAGCGCAGGGTCTTACGGTGACGAGCGGGGTCTTTTGAGCATTGCTTTTCACCCAGCATTTACCAAAAATCGCAGGTTCTTTGTGTACTATTCCACTcgtttacgaagaaaaataggACGCAAAAAGGATTCCAAAACGCCTTTCCTGGCTTTTGATCATAGAACGGTGCTTAGTGAGTTCAAGGCTTCCAGGTATAGCAGTAACAGAGGACTAAGGCGATCAGAGACAGTTATTCTTGAAGTTAATCAACCTGCATATAATCACAACGGTGGAATGATATTTTTTGGAACCGATGGACTTTTGTACTTGACGCTGGGAGATGGTGGACGAGGGGGAGATCCATTTGGAGAGATTGGTAACGGTTTAAACAGGTCGACTCTTCTTGGAAGTGTTATCCGCATCGACATTGACACCCGAGGGAATCTTTACAAAATCCCCTCGAACAACCCGTTCGTAGGTATCCCAGGGGTACGAGCGGAGATCTACGCCTATGGCACTCGCAACATGTGGCGCTGTTCTGTGGACAGGGGCGATAGGAAGACCAGGGAAGGAAAGGGACGAATATTCTGCGGAGATGTAGGACAGAACAAATACGAGGAGATCGATCTAATTTTGAAGGGAGGAAATTACGGATGGAGAGGATTCGAGGGCTTCAAATGCTTTGACAAGAAATTATGCAATTCATCTTTGCTGCgTGACGCTATTCCACCAATTTTCGCGTACAATCACTCCGTCGGGAAATCCATCGTTGGAGGTTACGTGTATCGCGGATGTCAAAACCCGAACTTATATGGAAAGTACATCCTTGGAGATACCATGACCTCGTAAGTTGCTAGGTTGTCTTCAGAGTTGCAAAGTCTATAGAGTGTGATTGCAATACAAAATACTACAATGAATCTTCTACCTCAAGATGCAGCAAATTGGTCAGCTTAGCGCCGGACTAGAATAGTAGATGCTTTGATCGGCCATGACATTGAAACATTTGTAAtattcaaaaataaaaccaaaaacgTAAGCATATGTAAGACGTcgattacatggcaaatttcagtCCGGGCTAAGAATTTCGGTCCGCCCACCGAGCTGAAATTTCGTTGCGATTACGtggcaaatttaatttcagCCCGGGAGGAATGCTTAAAATTGGACCGGGAAAATTTGCAGGAATGAGTTTTACATTCACAATTCAAGCGGTGCGCATGCCCAATTTgatatttcagcccgggctgaaatttgtaGGCGATTACATGAGGTTTCTCAGCCCGTTTGACCGGGTTGAAATTTTCAGCTCGGTTTGTGAAACCCGGCTGGAATTTTAAGTCCGGGCTGAGACTCTCTTCATGTAATTACAAACGTCTTTTTAAGAGGATTTGTGCAGAAAACCGAGCTAAAAATTCAGCCCGGCCAACCGGGCTTTAAATTCGTCATGTATTCGGCCCCTTAAGAGAACGGACAACATCAAAACCAAAGCTTAACCAACAATTAAATACGACTCACACAACGCTTTTATGAATGATGAATAATTGAACGTTTTCTCGAGACGTGAGTTTGAGCTTGAGCTGCCTGTGCCTTCACAGACTCAAATTGAGGGGACGTCCGAACTTCCAATAGCGTGCGAAGCCAGCTATTTTTCCGTGCctaattttgtttcttgtttcctttttttcttcccTCATTGGTCGCTTTTTCGCGCGgctataaaacaaaaaacgccTCCAACGCACTCGAAAACttagggagcggtcattatttagagcaaccccccc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03024 all species →	Folate_rec	Folate receptor family	Domain	Interproscan
PF07995 all species →	GSDH	Glucose / Sorbosone dehydrogenase	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018143 all species →	Domain	Folate receptor-like	Interproscan
IPR012938 all species →	Domain	Glucose/Sorbosone dehydrogenase	Interproscan
IPR011041 all species →	Homologous_superfamily	Soluble quinoprotein glucose/sorbosone dehydrogenase	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19328 all species →	HEDGEHOG-INTERACTING PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for FUN_047709-T2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_047709-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.