Detailed information of FUN_049067-T1 in Siderastrea siderea

Genomic Location: contig_73:573745...591470
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16756
all species →		PALB2_WD40Partner and localizer of BRCA2 WD40 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR031920
all species →		DomainPartner and localiser of BRCA2, WD40 domainInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042417
all species →		FamilyPartner and localizer of BRCA2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14662
all species →		PARTNER AND LOCALIZER OF BRCA2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_049067-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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