Gene detail

Detailed information of FUN_050108-T1 in Siderastrea siderea

Genomic Location: contig_76:3070946...3083091
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07039 all species →	SGF29_Tudor	SGF29 tudor-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010750 all species →	Domain	SGF29 tudor-like domain	Interproscan
IPR037802 all species →	Family	SAGA-associated factor 29	Interproscan
IPR047288 all species →	Domain	SAGA-associated factor 29, first Tudor domain	Interproscan
IPR047287 all species →	Domain	SAGA-associated factor 29, second Tudor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21539 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0035064 all species →	Molecular Function	methylated histone binding	Interproscan
GO:0043966 all species →	Biological Process	obsolete histone H3 acetylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11364	SGF29; SAGA-associated factor 29	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.