Gene detail

Detailed information of FUN_052658-T1 in Siderastrea siderea

Genomic Location: contig_86:1487306...1505523
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_052658-T1

ATGAAGTCTTCTATTTTCACAATCACCTTGATACTTTTTATGTTAGTCTTCAGTGCAGCAAGCCAGAAAAAGTTGGATCTAGGAGCCATTAACAGCCACCTGAAAAAGATGTGTTTAAGCAACCCAGACAATTACATCAAAGATCCGAACGTGGTTAAATGCAAGATAACTTATGATGTCGCCTGCTGGAAAGATACTCCAGCTGGGCAAACAGTCGTTCAACCTTGTCCTTTCCTGTTATTCTCAACAAAAGACAACATTTCCCGGCGATGTGACGAGCAAGGGGAATGGCAGAAAATGAACATAACAAATTGTCGCAGACTCACACCAAAAGTAGCTGTGGAGAAAGGAAAGCAGATTTCCAACATTACTGTAACTAATGCAACGGATGATTCCCTGACTCATTCGGAGCGAGTTAAGAGAGTTAATGTCATCTGCAGTTGGGTCGCGTTTGTCATCCTGTTGCCTACCTTCATCGCAATATGCATCGTCATAAGACATAATGATCGGTTAACCTTGcacaaaaatttaattttggCATTTATTCTGCGCATCCTCAccttattcatttattattatggaaaGATGGGAGAAAAGGAATCCAACAagACAGTTTGCAATGTATTCTGGTTGTTGAACCGCTACTTTGCAGCCTCAGAGATCACGTGGATGCTAAATGAAGGGATTTTTCTAATGCGCACGCTTGTGTATCCCTTCGATAACGAATCGTATCTCTGGTATTACTTTCTGTTCGGCTGGGgtttctctGGAGTTCTTACATTTTGTGTGTATCTTCCTTATGTACAGTTTAAGATTGCAAGAGTCAGCGAAAGTTGCTGGGTGAATCACAGCCACACGCATCATATGTTGGTGTTGTATGTTCCTTTGACGATCATGTTAGTGATCAACTTTGGCATCGCAGCCTATGTGGTTCGAATGCTCGCTAAGAAACTTAAGAATTCCCAGTCCTCACATATGAATACAATCAAAAAGGGCGCCAAGGCTGTAGTTATTCTGATCTCGCTCCTGGGATTGATCTACCTCCTTACTTTTTACCAACCAGAAAACAGCCCCGGATACAACTACTTTGTCGCTGTTGTTTACCCTCTCCAGGGAATAATGGTTTGCATATTCTGTGTATATCTCAGTATGGAGTTCCGTGAATCTTTCAGAAGATACTGGATGAAATGGAGATATGGAATATTAATAGAGACGAATCCATACTCCGCTACACATGACATCGAGCCAGGGCCCTCTGGAGAGCGGGGCACCTCAGCGAGCGTGTTGGTAGCAGAGTCCTCAGAGGAGTTACAACCCAGAGCCCGCTCCACCGCGTCCCTTAGAGATGCTTCAAGACCTCCAAGTGCTCAGACTATTTCCAAGCAATTTCCCGCAGAGCTCACAAAAAACAATTCCCAGAGGTCGCTTCTTTCCCGCTCAAGCGATCTGACAAAATATCGCCTCAAAAAGGTTGAACCTGAGCCCCTGAAACCTGTGCGAGTGCAGTCAGCGGGTCCAGAGGTCTGGTGCCCACCCACTCTTCATGCTGTCACGGCCTGGCAAGAGATCGAGTTATCCGAGAATCGACATGAACCGAACCTCAATCAAGGTCTCGACAATAAAGGTTTCTCTGCAAAAAGTGAGGGCGACATATCCCATCTTGGCAGTCAGAATTCTCTTCAACACAAAACTTCGTCTCAAGCGGAGCTAGACACAAATGAATCTGAAGATCCAAGTAATACCACACCAGAAGAAACAAGAGAGAGTTTTAGTAGTCAAACGTCTCTTGAACACAAAACTTTGTCTCAAGTAGAACTAGAGACAAACGACTTTGGTGGTCCAAGTAACTCTACACCAGAGGAAATAAGGGAGAGTTTAACGTCAAATTCTAATGAAGAATTTTCATTCTCGAGTCAGTCGTTTGAACATGACACGCGGCCTTCAACTGCTGACACTGAACTAACTGCATCTGGAGGTCAAATACTGACAACCACAGCTGGCCCAAGCATATCCCAAGATGCTCAGCCGTCGACGAGTACTGAAAATTCAAATGTTTTTTCTCGTGGAAAACAATTCTGGAACAAGGCGCAAAAACTAGCTTCTGAGAGAAGGAGATCACGACTCGAGCAGAACAGGGTGGTGTCAACAGAGGGCGATTCACTACATTTGCATCAAAAGTATGCCGACAAACAAAAGGACGCTGATGAGTACAGACTGGCCTGGATCGCTAAGATTCTCAGGGGAAATAATTCACATGAGAATGAGAGTGATGCCTGA

Transcript

FUN_052658-T1

CAAACTGATGCAATTTGAAACACCTGCGCACTTTACAAATAATTACTTTCTTCCTCCAGATCATTTTTCCATGCATTTAAATTGCATTTCCAGCAAATAATTGCCTTCTTGTTTTTATCGAAACTAGTTTCGGCGTACGATGATCTTCCTGTTAGACTCTCCGCCGTAGAACAGCAAAAAGAATCGAAATTGCCTCCCACACATGTAGCACGTAAAACAAATGTCACTGAACAGGACGGAAAATTGTAACTTTAATAATTACCTTTTGTTCGAGCAAACTTACATTCTTTTAACAAAAATGAAACGCCAGCATGGCTTAATACGTTTTTTTTACAGAAAGACAGTACACGTTTCTCCTTGTGCGCGAACTCTTTCACACGACTACACACGGCAAACCAATGTTAAAGTTTGTAACCCATGTTGGCGTAAGTTCCAAAACGTTGCAAAGGCCTCCGTCAGAACAAATATTATCTTCAAAATTTTACGTTGTTGCTTAAATCCTACAGTTTTTGGCAATTCTTTTAACAACTTTAGCGGCAAAGGCCAAGGGGTCGGCTTTTCCGATAATTTACTGGGCACGTTAAATCGTTCACTCCTGGATTTTTCGATAACCATCCTGGTGACTTACAGACAATCGCATACTTCCGTATAAAACTCAGTCCTAAAAACATTGGAAAGTTAACGCGACGGTGTGCTTCGAGAACCTTTACTTTGGCCCGGCCAAAAAGTTCTGGAAAGTTTCCAGAAACATACGCCAACCGCCTGTCCCTCTTGGCCGATAGGGCCTGAGAACGAAGGCAAGTTTGCAGCCAGCTGATAGACAGCTGAAAATGGCGTGGGGTGTCTACTTTTTCCGTGACCGAACAATGGTGCACACTCAAAACGGAAGTTATGCATGACTGGCAAACCGGAAGCCGTAAGCGGGAGTCACTATTCATTTCGTATCATAAGTGTTCTAGAGCATTTCAGTCAGCGCGATAAACAGATCAACTCAACCGAACACGGCTTATCATTGATTGAAAAGTACGCTTAGTGAATTCAACagattttcttgaaatttggCTAAAGAAGGTTGGAGTTCGCCAGCAGAGATATCTGTGGAGAAAATTTCCTGCACGCAGAGTAGAATACGATCATGTTACTTCCCAGAATTAAGTGGTTTCACAACTCGCGGTCACCAAGCGAAGTCCACAATAAACAGAGAAGCAGTTAACACGCTTGCTAATATCATGAAGTCTTCTATTTTCACAATCACCTTGATACTTTTTATGTTAGTCTTCAGTGCAGCAAGCCAGAAAAAGTTGGATCTAGGAGCCATTAACAGCCACCTGAAAAAGATGTGTTTAAGCAACCCAGACAATTACATCAAAGATCCGAACGTGGTTAAATGCAAGATAACTTATGATGTCGCCTGCTGGAAAGATACTCCAGCTGGGCAAACAGTCGTTCAACCTTGTCCTTTCCTGTTATTCTCAACAAAAGACAACATTTCCCGGCGATGTGACGAGCAAGGGGAATGGCAGAAAATGAACATAACAAATTGTCGCAGACTCACACCAAAAGTAGCTGTGGAGAAAGGAAAGCAGATTTCCAACATTACTGTAACTAATGCAACGGATGATTCCCTGACTCATTCGGAGCGAGTTAAGAGAGTTAATGTCATCTGCAGTTGGGTCGCGTTTGTCATCCTGTTGCCTACCTTCATCGCAATATGCATCGTCATAAGACATAATGATCGGTTAACCTTGcacaaaaatttaattttggCATTTATTCTGCGCATCCTCAccttattcatttattattatggaaaGATGGGAGAAAAGGAATCCAACAagACAGTTTGCAATGTATTCTGGTTGTTGAACCGCTACTTTGCAGCCTCAGAGATCACGTGGATGCTAAATGAAGGGATTTTTCTAATGCGCACGCTTGTGTATCCCTTCGATAACGAATCGTATCTCTGGTATTACTTTCTGTTCGGCTGGGgtttctctGGAGTTCTTACATTTTGTGTGTATCTTCCTTATGTACAGTTTAAGATTGCAAGAGTCAGCGAAAGTTGCTGGGTGAATCACAGCCACACGCATCATATGTTGGTGTTGTATGTTCCTTTGACGATCATGTTAGTGATCAACTTTGGCATCGCAGCCTATGTGGTTCGAATGCTCGCTAAGAAACTTAAGAATTCCCAGTCCTCACATATGAATACAATCAAAAAGGGCGCCAAGGCTGTAGTTATTCTGATCTCGCTCCTGGGATTGATCTACCTCCTTACTTTTTACCAACCAGAAAACAGCCCCGGATACAACTACTTTGTCGCTGTTGTTTACCCTCTCCAGGGAATAATGGTTTGCATATTCTGTGTATATCTCAGTATGGAGTTCCGTGAATCTTTCAGAAGATACTGGATGAAATGGAGATATGGAATATTAATAGAGACGAATCCATACTCCGCTACACATGACATCGAGCCAGGGCCCTCTGGAGAGCGGGGCACCTCAGCGAGCGTGTTGGTAGCAGAGTCCTCAGAGGAGTTACAACCCAGAGCCCGCTCCACCGCGTCCCTTAGAGATGCTTCAAGACCTCCAAGTGCTCAGACTATTTCCAAGCAATTTCCCGCAGAGCTCACAAAAAACAATTCCCAGAGGTCGCTTCTTTCCCGCTCAAGCGATCTGACAAAATATCGCCTCAAAAAGGTTGAACCTGAGCCCCTGAAACCTGTGCGAGTGCAGTCAGCGGGTCCAGAGGTCTGGTGCCCACCCACTCTTCATGCTGTCACGGCCTGGCAAGAGATCGAGTTATCCGAGAATCGACATGAACCGAACCTCAATCAAGGTCTCGACAATAAAGGTTTCTCTGCAAAAAGTGAGGGCGACATATCCCATCTTGGCAGTCAGAATTCTCTTCAACACAAAACTTCGTCTCAAGCGGAGCTAGACACAAATGAATCTGAAGATCCAAGTAATACCACACCAGAAGAAACAAGAGAGAGTTTTAGTAGTCAAACGTCTCTTGAACACAAAACTTTGTCTCAAGTAGAACTAGAGACAAACGACTTTGGTGGTCCAAGTAACTCTACACCAGAGGAAATAAGGGAGAGTTTAACGTCAAATTCTAATGAAGAATTTTCATTCTCGAGTCAGTCGTTTGAACATGACACGCGGCCTTCAACTGCTGACACTGAACTAACTGCATCTGGAGGTCAAATACTGACAACCACAGCTGGCCCAAGCATATCCCAAGATGCTCAGCCGTCGACGAGTACTGAAAATTCAAATGTTTTTTCTCGTGGAAAACAATTCTGGAACAAGGCGCAAAAACTAGCTTCTGAGAGAAGGAGATCACGACTCGAGCAGAACAGGGTGGTGTCAACAGAGGGCGATTCACTACATTTGCATCAAAAGTATGCCGACAAACAAAAGGACGCTGATGAGTACAGACTGGCCTGGATCGCTAAGATTCTCAGGGGAAATAATTCACATGAGAATGAGAGTGATGCCTGAGACATTTTTACCCAAGTCCTCCTAGCGATTAAAGAACAAGTAATCCAATTTCCAGACATCCGGGTACAACGCCTTGTTATTTGTCTCTAGAAATTCGCAGTCATCTCAAAGACCCAATTCATATAGTCTGTCGGCACAAGTTTACGGGGACGTTGCCTTTGGTTGACCCTTCTATGTTGCATGGTTTTACAAGCCGCGAAACATGGTAGGGTTATATTCTGCACGAAGTCTGCAAAGCCAACAAAAATTCATTTGGAGTTCATGGCATCCCCTATTACTCGACTTCCAGTTCTGCTGGAATCTGTGGTCACCACCCTGCTCAACAGAAAAAGCAAGACAAACGTGTGTCCACAAATGGAGTGAAAGATGTGTTAATGAAACACTTTATTTATTCAAGGAACGAAGtaaatttctttcaaatttcTGCAGGAGAAACCTCTCATACGTGACTGCCACCATCTTCATTTCGTTAGTTGCTTGTTCGTTGTTAAGGTCtctttgtttgttggttggtttgtttgtGATTGTTTTGCTTGCTTTTGAGGCCCCCGAAAAACTGTATATTGTTTCAGCGTGAATCAGGTTTATTCACATCATCTCTATCCATTCATTATTTAATTGCGGCGGATTGGCAATGTTTACTGAACATTCATAGGATTAAGAAGACTGATTGCATATGGAGTGAAAAATATGCAAACTGTAAAGAAGTCTTTAAATAAATCAACGTAACAAATAAAATATATTCAAGCTAATTTGACAAGGATGGTACATAACAGTTTACCCCAATAAATCTATTAGTCCATCAACATAATTTAATGAATAATGTATTTAACGGTGTTGTTTAAATAAGTGGAATAAAATGATCTTCCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR050332 all species →	Family	G-protein coupled receptor 2	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45620 all species →	PDF RECEPTOR-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007188 all species →	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_052658-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.