Gene detail

Detailed information of FUN_052779-T1 in Siderastrea siderea

Genomic Location: contig_86:2846358...2931919
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_052779-T1

AGGTATTCTTGCCAGGGTGTCTGAAGCTGATAAATCTGATATGCAAAAGCAGGGATATGAATATATTAGAATTGTGGTGTGCAATTTGTATCCTTTTGTGAAGACTGTTTCAAGGGAAGAATGCACTGTGGAAAATGCTGTAGAAGAAATTGACATTGGTGGTGTTACCCTTCTACGAGCTGCAGCAAAGAATCATGCACGTGTGACTGTCATCTGTGATCCTGAAGATTATGACAGGGTATCAGATGAAATAACCTCTACTGATGACCATGATACCTTACCTCACACCAGGAGAATGCTTGCACTAAAGgCTTTCAGTCATACTGCAGCTTATGATGAGGCCATTTCAGATTACTTCAGAAGGAAATACAGTGAAGGAATATCACACATTCCTCTTCGCTATGGTATGAACCCCCATCAGAAGCCAGCACAGCTGTTCACATCTGAGCCTAAACTGCCAGTCAACGTTCTGAATGGATCTCCAGGATTTATTAATCTCTGTGATGCCTTTAATTCATGGCAGCTTGTCAGGGAGTTACGACAATCCCTGGACATGCCAGCAGCAGCATCCTTTAAACATGTTAGTCCTGCTGGGGCAGCTGTTGGTGTGCCACTGACTGCTGAACAAGCCAAACTGTGTATGGTTGATGATATGATTGACAGCTTGACACCATTAGCTACAGCTTATGCCAGGGCTAGAGGAGCAGACAGGATGTCTTCATTTGGTGATTGGGTTGCTCTGTCTGACATCTGTGATCTTCCTACAGCAAGAGTAATTTCAAGAGAGGTTTCAGATGGGATCATTGCTCCAGGTTATGAACCAGATGCACTGGAAGTactgaaaaagaagaaaggagGGAAATACTGTGTACTTGAGATGGACCCTGGCTATGAACCCTCCGAGTTAGAGAGCAGAACCATCTTTGGACTTAAACTTGAGCAATTGAGAAACAATGCCAGAATTGATGAGAGTGTCTTCACCAATATAGTCAGCAAGAGACAAGATTTACCAAAGAGTGCCGTGCGAGACTTGATAGTGGCCAGTATTGCTCTGAAGTACACTCAGTCTAATTCTGTGTGTTATGCGAAGGATGGACAGGTAATTGGCATTGGTGCTGGACAGCAGTCTCGTATCCACTGTACCAGGATGGCAGGCGATAAAGCAAACAACTGGTGGCTGCGTCAGCATCCTAGAGTTTTAAGTATGGTTTTCAAGAAAggAGTCAAGAGAGCAGAGATGTCAAATGCCATTGACGTCTATGTTAATGGGACAGTTGGACAGGATACAGACAAAACATCTTGGGAGGAACTGTTCGAAAACCCACCAGAACTTCTTACAGAGGTATGTTCACATTCACACAGCAAtacttttttcactttcttcTCACTCTACAATCAGGTTTAGAGACCGTGGTATTCTTTTAAAGAACTCATTTGCTTACATATCATCATCACCATTCCCTCTTAGCTGTAGATgatactttaaaaataaaatgcagcTTTGTCCGCAAGGAGAGGAGGTGCCTTTAGTAGTATTTAGCAGCTGGCTATGACAGCTGGCTATGACAGCTAAGTATACGATATCGTGATAGGTAAATGCCCAAAGTACATGTAACAACCTATTGCTTGGCACAAAACCATATTGAGGACCATACTGTAAAATTCCGATAATAAGCCTACCCCTTcccaaaaaaattgccttccCGAATATACACCCCCGCCCATCTCATTTGCAAAAAGCCCTCCTATAATAAGCCCCTCCTCCCCCCCAAATATAAGCCAAGATCATCCTGGATAGGGCACCAACTGAAGCACTTGGAGCACTTGCAAATGCAACGCTGCCTTTAGATGTATAATTTAATAAATgacaacaacagaaacaacatGATCATCCGAGGTTTAGTCCATCACAGTCATAACACTTGCTCTAAGGACACTGTTCAAATTCAGGACTGGAATGCCCTGCCTATGGAGATGAGAAACCTATCTTATAATACTTTTAGAACACTGTTAGCATAATAGGTTTCAATTTTAAAGTAGCTTCCCATTTTCTTCCacttttaagtagaactttGGTGTCAACCCCCCTCTTAATTCATTTCCAATTATATTTAAATATTAGCATTTTAGCatttttagttaaattttatcttttattttacagTGCCCTATTAAAAACCACCTTGCgcgatataggccatctgtataaagaattgcatcattattattattattattattat

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01808 all species →	AICARFT_IMPCHas	AICARFT/IMPCHase bienzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002695 all species →	Family	Bifunctional purine biosynthesis protein PurH-like	Interproscan
IPR024051 all species →	Homologous_superfamily	AICAR transformylase, duplicated domain superfamily	Interproscan
IPR036914 all species →	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan
IPR024050 all species →	Homologous_superfamily	AICAR transformylase, insert domain superfamily	Interproscan
IPR016193 all species →	Homologous_superfamily	Cytidine deaminase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11692 all species →	BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003937 all species →	Molecular Function	IMP cyclohydrolase activity	Interproscan
GO:0004643 all species →	Molecular Function	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_052779-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.