Gene detail

Detailed information of FUN_053675-T1 in Siderastrea siderea

Genomic Location: contig_90:1927967...1965254
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04598 all species →	Gasdermin	Gasdermin pore forming domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042377 all species →	Family	Gasdermin-E	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR040460 all species →	Domain	Gasdermin, pore forming domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15207 all species →	NONSYNDROMIC HEARING IMPAIRMENT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0012501 all species →	Biological Process	programmed cell death	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_053675-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.