Detailed information of FUN_054063-T1 in Siderastrea siderea

Genomic Location: contig_92:2477070...2478789
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16573
all species →		CLP1_NN-terminal beta-sandwich domain of polyadenylation factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038239
all species →		Homologous_superfamilyClp1, N-terminal beta-sandwich domain superfamilyInterproscan
IPR032324
all species →		DomainClp1, N-terminal beta-sandwich domainInterproscan
IPR045116
all species →		FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755
all species →		CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388
all species →		Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0051731
all species →		Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_054063-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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