Gene detail

Detailed information of FUN_054076-T1 in Siderastrea siderea

Genomic Location: contig_92:2585378...2588619
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13949 all species →	ALIX_LYPXL_bnd	ALIX V-shaped domain binding to HIV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045251 all species →	Family	Vacuolar protein-sorting protein Bro1-like	Interproscan
IPR025304 all species →	Domain	ALIX V-shaped domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23030 all species →	PCD6 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000281 all species →	Biological Process	mitotic cytokinesis	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0071985 all species →	Biological Process	multivesicular body sorting pathway	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_054076-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.