Gene detail

Detailed information of FUN_055258-T1 in Siderastrea siderea

Genomic Location: contig_100:1430242...1443086
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_055258-T1

ATGGAGGACACTGACAAGGATACTCCAGTTGGACTGGCGGCAGATCCATCTCATGGACATGAGCAGGGCAGGCGGACATCTGAGCATGgAAGTGTTTTCGAATCAGAAGATGACCTTTTCCTTGGCACTGACGCTCAAGCATTTTCTGGGTCCAGACCATCAACACTCTCTCCAGGGAGCTCCAGTGTCTCTACTGGGTTTCACTATGAATCATCCGAGAGCACAGGAAACCCAGGAAGTCACAGGGTCATTAAAAAGCTGGCTCATGTTGGGAGACTGGAAAGTTCTGATAGCCTCACTTCTGACTTCTCCGATTTCAGCAGAACTTCCCACGATGTGAGTTCACTGCTAAACGCAATGACCGTGGACCCGGAAGAGTTTCTTACTGACCTGGGGTTTGCTGAACCGGACATGCGCACTCGTATACCAGATCGATTTCTTGAGTCGCCGTCCAACGCACGCGGGATTGATGTGGAGTTTTTCAAGCGAAGCCTGGATCAGGACGATCACTATGGCTCACTGTCTCAAGACTCTCCAGTATGGTCGGACCCAGGCATCAGTAGGATCCCGCTCAGGTTCTTAACATCTCATACGGAACCGATAAACACCGTGCTCAGCGGAGCTGACAGCTCTGTGCCCCTTATATCCGAACCCGAGGAGGCCCCCGAAGACTCGTTTGACTTGATGAGGCACCTCAGGCTCAATAAGCCTTGTCACGTGACTAAGGGGATGTTTCTAGAGCCAGTTACAGAAGAGCTTGAAGTTTCGTCGGTTGGGAGCGGGTCTGTGCGGACAAAGATTTCTAGGAAGCTCTCTAACGAGGAAGGAACAATAGTGAGAGAGGAGTCTTTAGAACAGGCAAACGTGGAAACGGAATTGATACTTGATGTCCCAGTTATGGAAAACGTAGACACAGGTTTGGAGCGGAATGAGTTAAAGGAGACGGAAGTTGCTGAGCAAGTTGAACGTAACTCACAGATCGTTGTAACTGTAGAAGGTGAAGAAGACACGAGTTTTTCTCATGATGAAGATGTCGTGATAGGCAACTCGGTGATATCTAGTGAAAGTAATGCAGACAATATCACTAATTATAACGCAGAAATCTACCAATGCGAGACAAGTGATCATAACAAAAACGACGTATCTGAAGACCTCCCAGCTATATTAGACGTAGCAATGACAGAAGTTTCTCCTTGTTTGCCAATCCCTGCGCATTTGAAAGTGGCAAGTATTGCTTTGCAAGATTCATTTGAACTCGAGGAAATTGCAAACGAAGACTTCAACGAGAGAGAATCATTCTCTTCTACAGATCAAGAAGCCGGATCAAATGTCAAGTCGTCAGAGAAACGTTTAACGAGAGAAAACAGCGGAGAAAGCAGCGGTTTTGAGGAGATGCTGCCGGATAAAGAAACACTTACCCCAAACTCTTCTTCCCCGACATTAGCTTTAAAGCGTTTCTCCACTGACGCGCATGTCATTGTAAGTGATAGCAGCAGACCTTTGGCAGCGCTTTTAGATCCGGAAATGCTCAGTTTTGCGGCAGACAAGGTCCGAGCGAGAGGTAAAAGTGCGGAAGAAAACTCTCCGCGTGCTACGTTCGCGCAAAGAAGAACAAGATCTTTAACTAAACAGCGTCCAGTTGACGAAGATACGGTGGCTTTGTGGGCGTTTAGTACCAGTTCAATGGCGCCGAATGTTTCTGCGGCCGAAGATGGAAATCTGGGAATGAAAGTGAGCCATGATACCTCTGAAAGTTTCGCGCCCAGTTTCCTCTCGAGTCATACTAAAGAACCAAGTATTGAATTTTCTAATTACAGTTCAAATAATTATGTTGATGCAACAGATGAAAACTGTAACACATTGTTCAAGTCTGGGCCTGACGAGGCTGCATTAGAAAAGCAGGATAACAGCTTAGAAAACCCAGAAGTGGCGCCTGTTAAAAGCCTTGAGGACGAATTAGAAAACAATGCAGAACTTCTGAGTCTTGAGGAGAATGCAAATTTCGCGATTTCGCAATCTGAGTCTAGCTCACGTCTTAAAAGTGAGATAACACTGGGAAACCAGAAAAATATTTCGAAATCAAGACCAGATCATGGGGACTCAGAGCACATTAATTCTGAAAATGTGGAATATGTCCATGAACAGAGGGATGACAATTTTCTTACCAATAACGGTGATAACATGTCTAGGCTCCAACCTAGCGTGCATTTTGAAGAGGAGACTCAAAACTTACGTGAAGTCGTTGCTGAGGGAAACTCTGCTCCTGATGAGTTGACAGAAGGAGTTGGTGCATGCGCAGAAGTGAAGCAGAAGGAGAAGGAATCCCAGAAGGCAATGCGAAAGGTTGATTTCGAATATCAACAGGTCAGTCTGAAATGA

Transcript

FUN_055258-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14722 all species →	KRAP_IP3R_bind	Ki-ras-induced actin-interacting protein-IP3R-interacting domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029325 all species →	Domain	ITPR-interacting domain	Interproscan
IPR043444 all species →	Family	Protein TESPA1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17469 all species →	SPERM SPECIFIC ANTIGEN 2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_055258-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.