Gene detail

Detailed information of FUN_055960-T1 in Siderastrea siderea

Genomic Location: contig_105:1147386...1162689
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_055960-T1

ATGGCTGCATGGGTGGAGGACTTGCGCGGTGACAGTTTTAGAATTTGTCTCAGAGAAACTAAACTTTTCGATGGGATTCACGAAAACATCAAAGTTGATTGGATGGTGTTTAGCAACCTGTCGCTTGAGAACTTTACTTTGACTGATAGTCTCGTATTTGCCAACAGCGACTCGCAGTCTCAACAAAATAACAACCCTTTTTGCAAGaaaataaacttctcaGAACCATTCTTCGCTCCACCTGTGGTAATTGTGACGCCAATTTGCAGTTATAAGGTTAAAAAATCACTTTTGCCTGGTTCTGGATGCAAAGCAATTACCGCCTGGGTCGAGTATACATCCACAAAAGATGCCGAAGTGTGCGTGCAAAAATACAACACAAACGTCAAGAAAGAAGTCGTCAAAGTCGACTACCTTGTGATTGGAGACCTGGATCCTTGTCTCGAGGTGACCTGTTATTACCACAGCCATTGCAAGGCGTTTGCACCCCACGACGCGCGCTGCGTGTGCGCAGAAAGCTGTCCATCATACAAAGAACCTGTCTGTTCATCAAACGGGACAACATACGAGAATAAATGTTTGTTTGAACAAGAAATGTGTCTTCTACAACTGAACTTCACCTTACAACATCCTGGAAGCTGTGAAGgATTTCCTTATCAACGAGGTCGCCGCCACATGCCTCATATTCCTTCTCTGGGTTATTCTCATTGTGAAACTATTCATTTCAAGCCTTATGTATTCTATCCTCATAAACCCATTGACGTGCAGATCACTGTCAATCATGTTGACACCAGTGACGAGTCCTATGTGCATGATGCCACTGTGTCGTGGGTTGAAGATATAACTATTGAACAGTTCACTGCATGTGTGATGGCGACGGGTTATAACGAGCGTAAATCGTATGCTAACGTGACAGTTGACTGGATAGCTTACCAGGGAGCCCCAGTGGGCGGTGTTACAGGGGAGGTACGAATTTCACAGTGGTGGACTGGCACGACATGCGAGACTGTGAATTTCCCAGTGGGAGAATTTTCAGTTAAACCCTCAGTTTTTGTGACGGCCAGGCATCTCAATTCAGGACTGAAGCGCGACGCAAGCTGTCTGTGGATTGAAGATGTTACCCAGAAGTCCTGTAAAGTTTGTTTGCGAGAGCTACAAAACTTTGCAGGGTCACACCAGGATATTTATGTTAACTGGCTGGTGTTTACGAATCTTCACAAGCCTCCATTTTTAGAGCATAACTCGATCAACTTTGCGAACAATAAAACTCCTGCAGTGGAACATAATAATGCTTTCTGTAGGGACGTCAACTTTGTCCATGTTTACAACATAACTCCACATGTCTTTGTTTCGGCGAGTCATTCAACTAAAGGAGGAAATCTAGATCCAGTCAATAATGGTATAACTGCCTGGGTTGAGTATATCAACAAGGCAGGTTTCCGTGTTTGTTTAAAAGAGTTATATGAAACAAAATACGATCCACTGACCGTAGTGTACACAGTGTCAACAGACGTGTGCCCGCGTGGATGGGGATATTTCAGTGGAAAGTGCTACTTAACAAGCGCTGAGTGTGCGCCATGGCTTACCGCTGTGTTGAATTGTTCATCAATGGATTCACATTTGGTGACGGTTCACAACCAAGAAGAAAACGTCTATATACAACATCGCCATAATGGCCAGCGATCCTGGATTGGACTCAACGACCGAAGTGTTGAAGGATCGTTTGTTTGGGCAAACAAGGAAACAAGCAGTTTTAGGTTCTGGGCTCCAGAACAACCAAACAACTTGAAAAACCAAGACTGCGTCCACACTCTTGGCGCCAAACATGGTTACGCTTGGAATGATGTGCCATGTGATAAATGCTACGACTATACTTGTTCAAAAGATATAGATGAGTGTGCAACGAATGTCCACAGCTGTGATGTGAATGCCATCTGTCAAAATACTGTGGGATCATATAACTGTCACTGTAAAGCTGGGTATATTGGCGATGGAAAGAAATGCAATGCAACGCGAGGATGGTATTCCCACGACCCTGCGTTCTCTTGTAAAGACATACGGGACCTTGGTTCCTCCAAAGGAGACGGGGAGTACTGGATCGACCTTGGGCAGAAGGGAAACCCTTTAAAAGTGTACTGCGACATGACAACTGACAGAGGAGGCTGGCTTCTTGTCGGCAGCGTTGTGGCTAAAAACCCAACTCTTCGCCAGTTCTCATTAAAGACGACTTACCGTGGAATAAGCAGCAAACAGATGTTTCTCAATACACGCGCCATGAAGGAGCTGAGGTCACTTATATCTTTCACTCAACTAAGATTCCACTGCAATAAGCAGCAGGGACGCACGATCCACGTGATCACGGCCACTACCAGCAAAGGCGAAGCTGTAGTAAAGTACTTCAGCGGTCAAACGGACGTCCAGCCTGCCTCGTGCGGTTCGTTTATCAGAATGAAAGATGACAACTCGAGGCTATCAACAGTTTGTGCACGGTGGGGTTGGGAAAAAGGTGTGTACCATGTCGGAAAATGGGGACATGGGGTAATGGGCGACAGATTAAACAATCACCCTGCTTTTGTTAAGAAATCTTATCATTATTTGCTTAGACCTGGTAGCTCCAGATGGGAATGCGATGATTACGTAGCTGGGGTGTCCACGGGTGATTTCTGGAAGGTTTTTGTTCGCTAG

Transcript

FUN_055960-T1

agaatattgttaaacgagaaagctaTATGTTATTATACATCTACCCATAAATCCATTAGGTTTCACCTTCATGTGTTTACACGGTTTATACGAAAACGtttttttcaatcgagtgtatGTAAGTTTGGCTATGAGGAGCCGAAGAGTTCTGAGATGAATTGTTAGTTCTGGTGTTAAGAGAACATTACCCATCAGAACAACAGGATTAATAAGTTTCATTCTTCGCTAGCATTACAAGGACCAACGACAACGTCTGTTTCACAAAATTTATTACCGTTATTACCAAAGATAGTGCTGAGGCAATTTAAAGGTAAATGTTCCAGCGTCTCCACTTCCACTCCAGAGCTAGCTACTTTAATTTTGTACGGGATCGAGATTCCTATATTGGAACTCTATTATTCTGAAATTAATTGCGTGTTTAAGTTTAAAAAAGGTGGATGTAGATTTTACTCCAATTAAATTCAATACGCAGTAAATAAGTCTAAAAAGGCATACGAgttcttggttttcctgctttgcgcatcgttttttttttaatttcttcactCTTTCTTTTCCCTATATATTTTTGTACACTTCTTTAAATTGTCGTTAATTTTcctttactttatttttactGCTTTTCTGTATTCCTTCACTTCTTATAAATTCCCttatttccttttatttttgtatatGTATCTCTAATGGTCTTCGTTTCTATATCATTTATTCCTTTGTCCTATCCCTTTTATAACGTAGTGCAAATTCAAactgtaaaattaaaaaaagtccTCTTGCGTATTACTATCCTTCCTTTATTTAGAATTTCCCAAAATCTCCAAGAATATTGGTGACTGCTAGGCACCAGATTCTACAGAGACCTCAAGACGCCATGGCTGCATGGGTGGAGGACTTGCGCGGTGACAGTTTTAGAATTTGTCTCAGAGAAACTAAACTTTTCGATGGGATTCACGAAAACATCAAAGTTGATTGGATGGTGTTTAGCAACCTGTCGCTTGAGAACTTTACTTTGACTGATAGTCTCGTATTTGCCAACAGCGACTCGCAGTCTCAACAAAATAACAACCCTTTTTGCAAGaaaataaacttctcaGAACCATTCTTCGCTCCACCTGTGGTAATTGTGACGCCAATTTGCAGTTATAAGGTTAAAAAATCACTTTTGCCTGGTTCTGGATGCAAAGCAATTACCGCCTGGGTCGAGTATACATCCACAAAAGATGCCGAAGTGTGCGTGCAAAAATACAACACAAACGTCAAGAAAGAAGTCGTCAAAGTCGACTACCTTGTGATTGGAGACCTGGATCCTTGTCTCGAGGTGACCTGTTATTACCACAGCCATTGCAAGGCGTTTGCACCCCACGACGCGCGCTGCGTGTGCGCAGAAAGCTGTCCATCATACAAAGAACCTGTCTGTTCATCAAACGGGACAACATACGAGAATAAATGTTTGTTTGAACAAGAAATGTGTCTTCTACAACTGAACTTCACCTTACAACATCCTGGAAGCTGTGAAGgATTTCCTTATCAACGAGGTCGCCGCCACATGCCTCATATTCCTTCTCTGGGTTATTCTCATTGTGAAACTATTCATTTCAAGCCTTATGTATTCTATCCTCATAAACCCATTGACGTGCAGATCACTGTCAATCATGTTGACACCAGTGACGAGTCCTATGTGCATGATGCCACTGTGTCGTGGGTTGAAGATATAACTATTGAACAGTTCACTGCATGTGTGATGGCGACGGGTTATAACGAGCGTAAATCGTATGCTAACGTGACAGTTGACTGGATAGCTTACCAGGGAGCCCCAGTGGGCGGTGTTACAGGGGAGGTACGAATTTCACAGTGGTGGACTGGCACGACATGCGAGACTGTGAATTTCCCAGTGGGAGAATTTTCAGTTAAACCCTCAGTTTTTGTGACGGCCAGGCATCTCAATTCAGGACTGAAGCGCGACGCAAGCTGTCTGTGGATTGAAGATGTTACCCAGAAGTCCTGTAAAGTTTGTTTGCGAGAGCTACAAAACTTTGCAGGGTCACACCAGGATATTTATGTTAACTGGCTGGTGTTTACGAATCTTCACAAGCCTCCATTTTTAGAGCATAACTCGATCAACTTTGCGAACAATAAAACTCCTGCAGTGGAACATAATAATGCTTTCTGTAGGGACGTCAACTTTGTCCATGTTTACAACATAACTCCACATGTCTTTGTTTCGGCGAGTCATTCAACTAAAGGAGGAAATCTAGATCCAGTCAATAATGGTATAACTGCCTGGGTTGAGTATATCAACAAGGCAGGTTTCCGTGTTTGTTTAAAAGAGTTATATGAAACAAAATACGATCCACTGACCGTAGTGTACACAGTGTCAACAGACGTGTGCCCGCGTGGATGGGGATATTTCAGTGGAAAGTGCTACTTAACAAGCGCTGAGTGTGCGCCATGGCTTACCGCTGTGTTGAATTGTTCATCAATGGATTCACATTTGGTGACGGTTCACAACCAAGAAGAAAACGTCTATATACAACATCGCCATAATGGCCAGCGATCCTGGATTGGACTCAACGACCGAAGTGTTGAAGGATCGTTTGTTTGGGCAAACAAGGAAACAAGCAGTTTTAGGTTCTGGGCTCCAGAACAACCAAACAACTTGAAAAACCAAGACTGCGTCCACACTCTTGGCGCCAAACATGGTTACGCTTGGAATGATGTGCCATGTGATAAATGCTACGACTATACTTGTTCAAAAGATATAGATGAGTGTGCAACGAATGTCCACAGCTGTGATGTGAATGCCATCTGTCAAAATACTGTGGGATCATATAACTGTCACTGTAAAGCTGGGTATATTGGCGATGGAAAGAAATGCAATGCAACGCGAGGATGGTATTCCCACGACCCTGCGTTCTCTTGTAAAGACATACGGGACCTTGGTTCCTCCAAAGGAGACGGGGAGTACTGGATCGACCTTGGGCAGAAGGGAAACCCTTTAAAAGTGTACTGCGACATGACAACTGACAGAGGAGGCTGGCTTCTTGTCGGCAGCGTTGTGGCTAAAAACCCAACTCTTCGCCAGTTCTCATTAAAGACGACTTACCGTGGAATAAGCAGCAAACAGATGTTTCTCAATACACGCGCCATGAAGGAGCTGAGGTCACTTATATCTTTCACTCAACTAAGATTCCACTGCAATAAGCAGCAGGGACGCACGATCCACGTGATCACGGCCACTACCAGCAAAGGCGAAGCTGTAGTAAAGTACTTCAGCGGTCAAACGGACGTCCAGCCTGCCTCGTGCGGTTCGTTTATCAGAATGAAAGATGACAACTCGAGGCTATCAACAGTTTGTGCACGGTGGGGTTGGGAAAAAGGTGTGTACCATGTCGGAAAATGGGGACATGGGGTAATGGGCGACAGATTAAACAATCACCCTGCTTTTGTTAAGAAATCTTATCATTATTTGCTTAGACCTGGTAGCTCCAGATGGGAATGCGATGATTACGTAGCTGGGGTGTCCACGGGTGATTTCTGGAAGGTTTTTGTTCGCTAGTGGATTAGTTTGCTGTGGTGCCCCGATGTTTATATCGGTTATTTCCTTAAGTTTCTTTTATGTTACAGTTAAACTACGAGGTACCTAGCTATTTTGTTAGTAATGATTATTATAATGTTACAATTAAGCTAAAAGCGAAGAGCTAGCTGGTTAGTACGGGTTCTTGTTTTAAGAAATATCTTGCTTGAACATGTCTCGGTACCTGAATGATAGCAGGGCTCTAGTAGTCTCGATTGTAAATGGTTAGGATTTATTACTGCTTTTACAAGGGTCCAAAAAACGCTTTTTTGAAACATCTTTCCGCTCTTAGCGTTTTGCCTAACTCGTCATTCTAGACGGATTAGCCGAGGATCATCACGATATCATCGGCATTGGCATGATGCGACTTAATTGGAATCGCAATGGTTGATGAGTTCGGCTTCGCCTCCCGGTGTAGTTTTCAACACTTCCCCGTACCCCGCCAATGAAACAAACTCAACCCCTTTCTCACTAGAGTATGAGTACTGTTCAACTCGCCTAGCTCGAAGGCAAAACACATGTTGGAGCCATTTTTAACGAAAGTTGTAAATAATCTTCTTGTTTCTTATAACAAAGCCTTACCTATAGTAACAACCAGCATAATTTTAAGAACCCAGAGGTTTAGGAGCCCTTAGGGTAAAGAAAGCTGTTTTTTAGACCCCAAACATATACAAATGAACCTGTTTTAGCCGAAAAAGTGAGACAGCGTATTATTTGTAGGAGAAAAAGGGCCTGTTTTGGGTTTTAAAAAAGACGACCTAGGGCATACGTAGTAGATTCTGTGATCGTTTAAAATCGCGGGGCTAAAGCCCTATTGGATTACTTTTCTGACCAGTCACAGGAACTTTAACCCCTTAAAAAATAAAGGACCCATTTAAGAAACTAATGAAATTAAAAAGGCAGATTTTTCAGTAGCCTCCAAATATGTAAGAATCTATTTAAGCTTATGTGGAAAAAATCGAGTGGTTCATATTTGAGGAGTTTTACTGCATGTAATCTTTTTAGAATTGGCTTAATAAAAAAGGGTATATCTACAGTTCAGTCGTCATATAGCTATAATTGTGGTTATATAAGGTGGAATACTACAAAATGTATCGCGATTTTATTGTGTCCTAAAGTGCTGTCAAGTATTCCCGtgttaaatattaaaaaaatgatttttaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan
PF00059 all species →	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF01410 all species →	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001304 all species →	Domain	C-type lectin-like	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR018378 all species →	Conserved_site	C-type lectin, conserved site	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR000885 all species →	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR037221 all species →	Homologous_superfamily	H-type lectin domain superfamily	Interproscan
IPR051004 all species →	Family	Dendritic cell-specific ICAM-grabbing non-integrin domain-containing protein	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22802 all species →	C-TYPE LECTIN SUPERFAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005201 all species →	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0044419 all species →	Biological Process	biological process involved in interspecies interaction between organisms	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_055960-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_055960-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

44TPM > 0

7Conditions

288.4Max TPM

37.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	10	41.14	202.54
holobiont · low.pH Control.temp	20	7	31.24	149.62
holobiont · control.pH_high.temp	20	11	52.50	288.36
holobiont · control.pH Control.temp	19	10	35.66	182.62
Whole organism	4	4	1.98	2.99
unannotated	1	1	1.45	1.45
live coral tissue/skeleton	1	1	0.83	0.83

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	202.54
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	100.55
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	97.05
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	88.64
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	88.63
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	81.10
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	67.82
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	54.22
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	21.28
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	20.93
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	149.62
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	124.70
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	107.36
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	93.96
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	71.91
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	59.43
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	17.82
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	288.36
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	173.57
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	156.89
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	117.85
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	93.03
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	76.44
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	74.86
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	32.49
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	21.58
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	9.80
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	5.06
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	182.62
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	103.95
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	92.70
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	90.54
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	88.89
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	41.56
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	34.78
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	28.90
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	7.76
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	5.91
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	2.99
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	2.09
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	1.66
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	1.18
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	1.45
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	0.83

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.