Gene detail

Detailed information of FUN_056244-T1 in Siderastrea siderea

Genomic Location: contig_107:1356912...1376761
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11882 all species →	DUF3402	Domain of unknown function (DUF3402)	Family	Interproscan
PF00157 all species →	Pou	Pou domain - N-terminal to homeobox domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021819 all species →	Domain	Far11/STRP, C-terminal	Interproscan
IPR010982 all species →	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR000327 all species →	Domain	POU-specific domain	Interproscan
IPR040185 all species →	Family	Far11/STRP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13239 all species →	PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_056244-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.