Detailed information of FUN_058178-T1 in Siderastrea siderea

Genomic Location: contig_137:434887...439116
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10491
all species →		Nrf1_DNA-bindNLS-binding and DNA-binding and dimerisation domains of Nrf1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019525
all species →		DomainNuclear respiratory factor 1, NLS/DNA-binding, dimerisation domainInterproscan
IPR039142
all species →		FamilyNRF1/Ewg familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20338
all species →		NUCLEAR RESPIRATORY FACTOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_058178-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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