Detailed information of FUN_34114-T1 in Colpophyllia natans

Genomic Location: contig_22:2218118...2221556
NR annotation: KAJ7394750.1, peptidase M10A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13943Interstitial collagenase OS=Oryctolagus cuniculus OX=9986 GN=MMP1 PE=2 SV=1
P79227Macrophage metalloelastase OS=Oryctolagus cuniculus OX=9986 GN=MMP12 PE=2 SV=1
P03956Interstitial collagenase OS=Homo sapiens OX=9606 GN=MMP1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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