Detailed information of FUN_34364-T1 in Colpophyllia natans

Genomic Location: contig_36:2772172...2820580
NR annotation: XP_022783731.1, LOW QUALITY PROTEIN: laminin-like protein epi-1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P02469Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3
P07942Laminin subunit beta-1 OS=Homo sapiens OX=9606 GN=LAMB1 PE=1 SV=2
P11046Laminin subunit beta-1 OS=Drosophila melanogaster OX=7227 GN=LanB1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000034DomainLaminin IVInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06240LAMA3_5; laminin, alpha 3/5-Toxoplasmosisko05145deepkoala

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