Gene detail

Detailed information of FUN_61122-T1 in Siderastrea siderea

Genomic Location: contig_38:6999305...7023670
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_61122-T1

ATGGAGGACGACGTCGAGGAGTTTATTTTCATTCCACCTCCAGAGGCCCCAGTCTTCGAACCCACCGAAGAGGAATTCCAGGACCCTTTGGCGTATATTGCAAAGATAAGGCCTTATGCGGAGAGAACAGGCATTTGCAAGATTCGGCCTCCCCCGGAGTGGCAGCCCCCGTTTTCAGTAGAAGTGGAAAATTTTAGGTTCACACCGAGAGTACAGCGTCTCAATGAACTTGAGGCGAGAACCAGGGTGAAACTCAACTTTTTAGACAGTCTTGCCAAATTCTGGGAACTTCAGGGAACAACCTTCAAAATTCCAACGGTGGAAAGAAAATCTTTGGACTTATTTCGTCTTCATAAGACTGTGAATGAGGAAGGAGGATTTGAGCATAttacaagaaagaagaaatggTCCATTGTAGCAAGAAAgATGGGTTATCAAGTCGGCAAATCAGCTCCCTCCCTTTTGCGCATGAATTATGAAAGGTTCCTTTACCCTTACGACATCTTTCAAGCAGGAGCCTTCACTGGAGATCCTCCACCCTCTCAGGTTGACACGAAGAAAGAAGAGAAGGATAAGGAGAAAGATAAGGACTACATTCCAAACTGTACAGCCAACACCAATTACCAGATGTCACGAAGATCAAAGAAATTAGTTAAAGCTGAGGACGAGCTTGATTCCATAGACTATGAGAACAACCCAGAGTTGAAGAAGCTACAGTTTGTTGCTCCTGGTCCTAAAATGGCTGGATTATCAAAAGGCACCTTGCTACCTAAAAAGGAAATGAATATTAAGGAAGGAACTCAAGAAAGCCCAGTAAAAATGGAAATCACAGCCAGCGTTGAAGTGCTCAGCAAAACTGAACCCTCTCCTCGTAAAACCAAGTCTGCAGGGGAGATCTCTCCTTCCCCCAGTAAACAGAGAAGGCAGAAGCAAAATCAAAACGTTAAGCTCAAACTTGACTGTTTGGTGCAAAAGGATCCTGAATTGACCAGAAGAAGGCCAATACGAAAGGCCAGCCGCAAAAATTATTATCCAGACTCACTGAATGTCCTGCAGGATGAATACTTGTGTCAAGTGTGCAGTAGGGGGGATTCTGAAGAAAGCATGCTACTGTGTGATGGTTGTGATGACAGTTACCACACTTACTGTTTGATCCCACCGCTGTCATCAGTTCCACGTGGGGATTGGAGGTGTCCAAGATGTGTGGCAGAGGAGTGTAACAAACCAACTGAAGCATTTGGATTTGAGCAAGCCAAGAGAGAGTACACACTACAGTCATTTGGGGAAATGGCTGACAACTTCAAGAGAGAATACTTCAAACTTCCCCCTGAGCAGGTCCCCACTGAAGTGGTAGAGAAAGAGTTCTGGAGACTGGTGTCCACAATGGATGAAGATGTAACTGTTGAGTATGGTGCTGATCTGCATACAGCAGTTCATGGCAGTGGATTTCCACGCAAATTTAATGCTATTACTAGTGAAGAGGAGttttatgcCAAATCAGCTTGGAATCTAAACAACCTTCCAAATCTAGAGAGATCAGTGTTGTCCCACATTAGTGCTGATATATCAGGAATGAAGGTTCCATGGATATATGTTGGTATGTGTTTCAGCAGTTTTTGTTGGCACAATGAAGATCACTGGAGCTACTCAATTAACTACATGCACTGGGGTGAGCCCAAGACATGGTATGGTGTACCAGGAGATTGTGCTGTAGATTTTGAACGCTCAATGAAGGAGGCAGCTCCAGAACTGTTTGAAACTCAACCCGATCTTCTTCATCAACTCGTCACCATTATCAATCCTAATGCACTTACTGCCAAAGGTGTTCCTGTGGTGAGAACAAATCAGTATGCTGGCGAGTTTGTGGTCACATTCCCTAGGGCTTATCACGCTGGATTTAACCATGGTCTGAATTTGGCAGAAGCTGTCAATTTTGCCACAGCGGACTGGCTTCCCATTGGGCGTAAATGTATTGATCATTACCGTGAAATGCGTAGAAATCCAGTATTTTCTCACGAGGAGTTAGTTTGTAAGATGGCTGCTGATCCCGATGGTTTGGATTTGGACCTGGCCAAAGCAGTCTATGATGAAATGTTGGCTGTTGTAGAGAAAGAAGCTAATCGTAGACACCGTTTGAAAAGAAAGGGTATCCTAGAGTTTGAACGTGGTGAAGCATTTGAGTTACTACCTGATGATGAACGGCAGTGCAGTGTATGCAAAACCACTTGCTTTCTCTCTGCTATCCAGTGTTCGTGCAGTCCAGGTAAACTGATTTGCCTGGACTGCATGCCAGAGCTATGCTGCTGTGAATCATCAGAAAAGAGTCTGAGGTATCGATACACTCTTCAAGAACTGCCTTCCATGTTGTTACGCCTCAAGAGAAGAGCTGATTCATTTGATAACTGGGCCACTGAAGTCAAGAGGGCCCTTGATCCCTCAGATCCTAAAGTCGATGTATCAGAGCTGAAGGATCTGGTGAACACTGCAGAACAGAGCCAGTTCCCTGACTGCGATCTGTTTCAGCAGCTCAAGGCTGCAGTGGCAGAAGCTGAACGCTGTGCTAGTGTCGCACTGCAGCTGGTCAGCAGGAAATACAGGACCAGGCCCCACAGTGGTACAGACACAGTTCCAACTACTCGTCTAAGCCTTGATGAGCTACAGGGATTCATGCAACAATTACAGAACTTGCCTTGCATTGTCAGGGAGGCAGATTTAGTGCAAGAACTGATGACACATGTTGAGAGTTTCCAGTGTGAAGCCCAGAAGGTGATACAGAGTGGAACAACTGATGTGACCAGACTCCAGCAACTACTGGACAATGGACATACATTGGATGTCGACTTGCCAGAAATACCAAAACTCAAACAGGAATTACGGCTGGCCAAGTGGCTAGAGCAAGTGAACGCTACTCTCGCCAACACACAAGAAGTCTCATTTGATATCCTACAAGAACTACTTGAAACTGGAAACTCACTTCCACAGAAAACTGCTATTGAGAAAGCAGTCAGTGAACTCCGTGGTCTTGTGGCTCTTGGTGAACGGTGGGAAGAAAAGGCGAAACTGTGTCTTCAAGCCAGGCCGCGTCACGTGATGGCCACTGTTGAGGCGATTATACAAGAAGCATCTCGCGTGCCGTTATACCTTCCAAACGTGAGCGCTCTCAAGGAGGCTCTCCGCAAGGCACGTGAATGGTCTGACAAGGTCGACCAGGTTCAGAATGATGATTACTATCCTTACCTTGACGTGCTGGAGTCCCTGGTGATGCGAGGTAGGCCCATTCCTGTACGTCTGGAACAGCTCCCTCAGATGGAGTCCCAAGTGGCTGCAGCACGTGCTTGGAGGGACCGTGCAGCTAGGACATTTCTCAAGAAAAATTCTACAGCCACTTTGTTAGAGGTCTTGTCTCCCCGGAAGGATGTTGGATTATACAAAGCGTGTCCAAAACCGCGCAAAAAGCgcgagaaagaaaaggaaaaggaaaaagaaaaagagaaggaAGTGTTAATCGACCTCGTCGCGTTGGACGAGTATATCGGCAGAGATCCTGCCTTGCAGATCGCTGAATTTAGAGAgactgaaagaaaagaaatggaGGCAATGCGACAGCTACGTGAAGTAAACGTCCAGCGGCAAAAGGAAGAAGACAATAAAAGGAAACTTGGCGAAAGACTGTCAGATGGACAGTACTGTATATGTCGGCGAGGACCAGACGGGTTTATGTTGCAGTGTGAGCTCTGTAAAGAATGGTATCATGGCTCTTGTGTTCCTCTGCCGCGAACGCAGGGCGGTAAATCAATGGGCAAAAGCTCTGCTTCCCTAGAGGCAGCTAAGGAGCTGAAGTATTTGTGTCCGCTCTGCTTAAGATCCAGAAGACCGCGTCTGGAGACCATCCTATCCCTGCTAGTATCGCTACAAAAGCTGCCCGTGCGCCTCCCTGAGGGGGAAGCGTTGCAGTTCCTCACTGAAAGAGCAATGAACTGGCAAGATCGTTCGAGGCAGTTTCTAGCCGACGAGGATGTGGCCACTCTTCTCACTTTTCTAAGTAGAAATTCGACTAGTTTGCCTCACGGAGTCAGCGCCGAGAATTTGTCTGCTTCGGCAGCTCTTCTTCGGCTCGCTCAAGGAGGTCCCCAGGATGAAGACTCGGATAAACCCACATCCAGTGACGTGTCCGTCACAGACGAAAGTAGTACGAGCTCAGCCGAAGCGAAACCGACTTTGTCCGAAGAGAAACGAAGGCAAGCGGAAGTGCTGATGATGGAGGGAGATATGCTTGAAGTGTCGCTGGATGAAACTGAGCAACTTTGGAAAGTGTTGCTCAGTCAGAAAAGTCGAGAGGAGCAGGAAACACAGGTGTTTGAGACAAAGACAGATAAGGAAAAGGTAAAGAGAAAACGTAAGAAGAAAGATGatgaagagaaagagaaagaaaagttaGGAAGCAGACCGTCGAACACGAGCTCCAACTCAGGCGCAACGACTGAAACagaaacaccaaagaaacgacggcgaaaggaaaaagaaaaggcGGTGAAGGTGAAACAAGAGGAGATAGTTGATGTtgaagaagaagatgatgatgatgaggatgacgaGTTATGTGCAGCAGCTAAGTGTACAAGACCACAGGGAGACGAAGTCGGTTGGGTTCAGTGTGACGTCTGTGAGAAATGGTATCACCTTGCGTGTGTCGGGCTGAGCCCAGAGAAGGCAGAAGCTATGGATTCTTACAACTGCCGACAGTGTGTTGGAGGGGGATCGTCTGCTAACTCAGCTGGAGGGACCCCGGCAGCTGCCTCACCCGAGTCCGAGAATATAGACGTGGATGGGACCACACCGTCTGCCACAACCCCTACCTCGCCCATCCCCCCTGTCTGCATTGTTGATGTTGAAGGCACAGAGGCTGTACAGCAGAAAGAAAACGGGTCAGAAACTGGCCGTGCTTCTGTGGTACAGCGCACGTCACAAAAGCCGCCTTTGGTGACCACAATTGATTTGTGCTCCGACACGGAAGATATGGAAGCTGATGATGACATCGATGTTGAAACTGGAAACACTGAGAGAGGCGGCAATGACTAA

Transcript

FUN_61122-T1

CGCGAGGGCAAAGCTGCGTTGAAATATCTATTTGCAGCTATTAAACTGCTTGCGTCCGTTTTGCCCTTAATGCAAGTTCAGGGGTATATTTAGAACTGTTGGCTTTGTTTAGAGTTCCGTTGCCTTTGCGTCTCCATGCCAGCGGCGCAGACAGCCGGAAAATTTGATTAGATGGTGTTAATGCCCGCTCACGTGTTTCACTTGAACTTCTAGAAACCTTGAGGTATATGCTAAGAAAAAATGATCATAGTCTAATTATTAGAGTGGGATTTCGATGAAggatttttcacaaatcatagcGACTGAGTAAGACATGAATAATTTAAGATACATAtctcgaaaaaaaattatagccGTTTAAGGAAGTGACCTTTTATAAGCCACCATTGACTTGACAAAGCCAAACATGTGATAACCACAAATCACGTTTGTTCGATCATGTGAAATTTTTCACGCAACGGACAGGAAATGTCTCTGCGCGGGTGGTTGTCACGGAATAATCAGAAATCACTTGTCCCTTCACGTGTTTGCTTTCGAGCAAAATAAATTCTAAGACTGTGATGAAATATTAAAACGTTCGCGTAATTCAAATCGTGAGTTTAGCTTTAAAGCCCAGAGTGGTTTCTTTACTTCCCTATGTATATTGAGTTTTCAACAGATTTGTAAAAGAGTTTTTCTTCTCCTTTTAATGAAAACTTTACGTCATGATTAAAAACCAGAGAGccaatcaaaagttagaattgTAGTCACGTGACATCCCAAATAAAAGCCAGTAGAGCGGTCAGTCATATGAGATGATTAGTCGATTTTAAAAATGGCGTTGGTTCGGGAAAAATGTGAGTCCTTTGTTTTGAAATGGCTGATCGTGTCTTGACTCGACAACAGTCATGGAGGACGACGTCGAGGAGTTTATTTTCATTCCACCTCCAGAGGCCCCAGTCTTCGAACCCACCGAAGAGGAATTCCAGGACCCTTTGGCGTATATTGCAAAGATAAGGCCTTATGCGGAGAGAACAGGCATTTGCAAGATTCGGCCTCCCCCGGAGTGGCAGCCCCCGTTTTCAGTAGAAGTGGAAAATTTTAGGTTCACACCGAGAGTACAGCGTCTCAATGAACTTGAGGCGAGAACCAGGGTGAAACTCAACTTTTTAGACAGTCTTGCCAAATTCTGGGAACTTCAGGGAACAACCTTCAAAATTCCAACGGTGGAAAGAAAATCTTTGGACTTATTTCGTCTTCATAAGACTGTGAATGAGGAAGGAGGATTTGAGCATAttacaagaaagaagaaatggTCCATTGTAGCAAGAAAgATGGGTTATCAAGTCGGCAAATCAGCTCCCTCCCTTTTGCGCATGAATTATGAAAGGTTCCTTTACCCTTACGACATCTTTCAAGCAGGAGCCTTCACTGGAGATCCTCCACCCTCTCAGGTTGACACGAAGAAAGAAGAGAAGGATAAGGAGAAAGATAAGGACTACATTCCAAACTGTACAGCCAACACCAATTACCAGATGTCACGAAGATCAAAGAAATTAGTTAAAGCTGAGGACGAGCTTGATTCCATAGACTATGAGAACAACCCAGAGTTGAAGAAGCTACAGTTTGTTGCTCCTGGTCCTAAAATGGCTGGATTATCAAAAGGCACCTTGCTACCTAAAAAGGAAATGAATATTAAGGAAGGAACTCAAGAAAGCCCAGTAAAAATGGAAATCACAGCCAGCGTTGAAGTGCTCAGCAAAACTGAACCCTCTCCTCGTAAAACCAAGTCTGCAGGGGAGATCTCTCCTTCCCCCAGTAAACAGAGAAGGCAGAAGCAAAATCAAAACGTTAAGCTCAAACTTGACTGTTTGGTGCAAAAGGATCCTGAATTGACCAGAAGAAGGCCAATACGAAAGGCCAGCCGCAAAAATTATTATCCAGACTCACTGAATGTCCTGCAGGATGAATACTTGTGTCAAGTGTGCAGTAGGGGGGATTCTGAAGAAAGCATGCTACTGTGTGATGGTTGTGATGACAGTTACCACACTTACTGTTTGATCCCACCGCTGTCATCAGTTCCACGTGGGGATTGGAGGTGTCCAAGATGTGTGGCAGAGGAGTGTAACAAACCAACTGAAGCATTTGGATTTGAGCAAGCCAAGAGAGAGTACACACTACAGTCATTTGGGGAAATGGCTGACAACTTCAAGAGAGAATACTTCAAACTTCCCCCTGAGCAGGTCCCCACTGAAGTGGTAGAGAAAGAGTTCTGGAGACTGGTGTCCACAATGGATGAAGATGTAACTGTTGAGTATGGTGCTGATCTGCATACAGCAGTTCATGGCAGTGGATTTCCACGCAAATTTAATGCTATTACTAGTGAAGAGGAGttttatgcCAAATCAGCTTGGAATCTAAACAACCTTCCAAATCTAGAGAGATCAGTGTTGTCCCACATTAGTGCTGATATATCAGGAATGAAGGTTCCATGGATATATGTTGGTATGTGTTTCAGCAGTTTTTGTTGGCACAATGAAGATCACTGGAGCTACTCAATTAACTACATGCACTGGGGTGAGCCCAAGACATGGTATGGTGTACCAGGAGATTGTGCTGTAGATTTTGAACGCTCAATGAAGGAGGCAGCTCCAGAACTGTTTGAAACTCAACCCGATCTTCTTCATCAACTCGTCACCATTATCAATCCTAATGCACTTACTGCCAAAGGTGTTCCTGTGGTGAGAACAAATCAGTATGCTGGCGAGTTTGTGGTCACATTCCCTAGGGCTTATCACGCTGGATTTAACCATGGTCTGAATTTGGCAGAAGCTGTCAATTTTGCCACAGCGGACTGGCTTCCCATTGGGCGTAAATGTATTGATCATTACCGTGAAATGCGTAGAAATCCAGTATTTTCTCACGAGGAGTTAGTTTGTAAGATGGCTGCTGATCCCGATGGTTTGGATTTGGACCTGGCCAAAGCAGTCTATGATGAAATGTTGGCTGTTGTAGAGAAAGAAGCTAATCGTAGACACCGTTTGAAAAGAAAGGGTATCCTAGAGTTTGAACGTGGTGAAGCATTTGAGTTACTACCTGATGATGAACGGCAGTGCAGTGTATGCAAAACCACTTGCTTTCTCTCTGCTATCCAGTGTTCGTGCAGTCCAGGTAAACTGATTTGCCTGGACTGCATGCCAGAGCTATGCTGCTGTGAATCATCAGAAAAGAGTCTGAGGTATCGATACACTCTTCAAGAACTGCCTTCCATGTTGTTACGCCTCAAGAGAAGAGCTGATTCATTTGATAACTGGGCCACTGAAGTCAAGAGGGCCCTTGATCCCTCAGATCCTAAAGTCGATGTATCAGAGCTGAAGGATCTGGTGAACACTGCAGAACAGAGCCAGTTCCCTGACTGCGATCTGTTTCAGCAGCTCAAGGCTGCAGTGGCAGAAGCTGAACGCTGTGCTAGTGTCGCACTGCAGCTGGTCAGCAGGAAATACAGGACCAGGCCCCACAGTGGTACAGACACAGTTCCAACTACTCGTCTAAGCCTTGATGAGCTACAGGGATTCATGCAACAATTACAGAACTTGCCTTGCATTGTCAGGGAGGCAGATTTAGTGCAAGAACTGATGACACATGTTGAGAGTTTCCAGTGTGAAGCCCAGAAGGTGATACAGAGTGGAACAACTGATGTGACCAGACTCCAGCAACTACTGGACAATGGACATACATTGGATGTCGACTTGCCAGAAATACCAAAACTCAAACAGGAATTACGGCTGGCCAAGTGGCTAGAGCAAGTGAACGCTACTCTCGCCAACACACAAGAAGTCTCATTTGATATCCTACAAGAACTACTTGAAACTGGAAACTCACTTCCACAGAAAACTGCTATTGAGAAAGCAGTCAGTGAACTCCGTGGTCTTGTGGCTCTTGGTGAACGGTGGGAAGAAAAGGCGAAACTGTGTCTTCAAGCCAGGCCGCGTCACGTGATGGCCACTGTTGAGGCGATTATACAAGAAGCATCTCGCGTGCCGTTATACCTTCCAAACGTGAGCGCTCTCAAGGAGGCTCTCCGCAAGGCACGTGAATGGTCTGACAAGGTCGACCAGGTTCAGAATGATGATTACTATCCTTACCTTGACGTGCTGGAGTCCCTGGTGATGCGAGGTAGGCCCATTCCTGTACGTCTGGAACAGCTCCCTCAGATGGAGTCCCAAGTGGCTGCAGCACGTGCTTGGAGGGACCGTGCAGCTAGGACATTTCTCAAGAAAAATTCTACAGCCACTTTGTTAGAGGTCTTGTCTCCCCGGAAGGATGTTGGATTATACAAAGCGTGTCCAAAACCGCGCAAAAAGCgcgagaaagaaaaggaaaaggaaaaagaaaaagagaaggaAGTGTTAATCGACCTCGTCGCGTTGGACGAGTATATCGGCAGAGATCCTGCCTTGCAGATCGCTGAATTTAGAGAgactgaaagaaaagaaatggaGGCAATGCGACAGCTACGTGAAGTAAACGTCCAGCGGCAAAAGGAAGAAGACAATAAAAGGAAACTTGGCGAAAGACTGTCAGATGGACAGTACTGTATATGTCGGCGAGGACCAGACGGGTTTATGTTGCAGTGTGAGCTCTGTAAAGAATGGTATCATGGCTCTTGTGTTCCTCTGCCGCGAACGCAGGGCGGTAAATCAATGGGCAAAAGCTCTGCTTCCCTAGAGGCAGCTAAGGAGCTGAAGTATTTGTGTCCGCTCTGCTTAAGATCCAGAAGACCGCGTCTGGAGACCATCCTATCCCTGCTAGTATCGCTACAAAAGCTGCCCGTGCGCCTCCCTGAGGGGGAAGCGTTGCAGTTCCTCACTGAAAGAGCAATGAACTGGCAAGATCGTTCGAGGCAGTTTCTAGCCGACGAGGATGTGGCCACTCTTCTCACTTTTCTAAGTAGAAATTCGACTAGTTTGCCTCACGGAGTCAGCGCCGAGAATTTGTCTGCTTCGGCAGCTCTTCTTCGGCTCGCTCAAGGAGGTCCCCAGGATGAAGACTCGGATAAACCCACATCCAGTGACGTGTCCGTCACAGACGAAAGTAGTACGAGCTCAGCCGAAGCGAAACCGACTTTGTCCGAAGAGAAACGAAGGCAAGCGGAAGTGCTGATGATGGAGGGAGATATGCTTGAAGTGTCGCTGGATGAAACTGAGCAACTTTGGAAAGTGTTGCTCAGTCAGAAAAGTCGAGAGGAGCAGGAAACACAGGTGTTTGAGACAAAGACAGATAAGGAAAAGGTAAAGAGAAAACGTAAGAAGAAAGATGatgaagagaaagagaaagaaaagttaGGAAGCAGACCGTCGAACACGAGCTCCAACTCAGGCGCAACGACTGAAACagaaacaccaaagaaacgacggcgaaaggaaaaagaaaaggcGGTGAAGGTGAAACAAGAGGAGATAGTTGATGTtgaagaagaagatgatgatgatgaggatgacgaGTTATGTGCAGCAGCTAAGTGTACAAGACCACAGGGAGACGAAGTCGGTTGGGTTCAGTGTGACGTCTGTGAGAAATGGTATCACCTTGCGTGTGTCGGGCTGAGCCCAGAGAAGGCAGAAGCTATGGATTCTTACAACTGCCGACAGTGTGTTGGAGGGGGATCGTCTGCTAACTCAGCTGGAGGGACCCCGGCAGCTGCCTCACCCGAGTCCGAGAATATAGACGTGGATGGGACCACACCGTCTGCCACAACCCCTACCTCGCCCATCCCCCCTGTCTGCATTGTTGATGTTGAAGGCACAGAGGCTGTACAGCAGAAAGAAAACGGGTCAGAAACTGGCCGTGCTTCTGTGGTACAGCGCACGTCACAAAAGCCGCCTTTGGTGACCACAATTGATTTGTGCTCCGACACGGAAGATATGGAAGCTGATGATGACATCGATGTTGAAACTGGAAACACTGAGAGAGGCGGCAATGACTAAAACGTCGATTCCTTATGTATGAGAACAATTTTCAGTTCAAGTTGCAGCAGAGAGACACATCTGATAGATCTAGCTTGTACTATAACGCCTACATAATGAATACTTGAATATTTTTTCAGGAATTTAGCGTACGATGCCCAAATTCGTGTAGAGGCACTGTGCCTTTACGCCAGGGAGTTTTTGTAAAATGATGTCAAAGAAGAGTAGCATCCTTGTTTTGGATCGATCTCGATAATTTGTCATTCCAAATTTTGTTAGAAATCCCCATCAGTTGTCGTCTATCGGCGCGTGTCCCTCGTAGAAAAACTCGAAGGTATTCCGAGTCTGGAGTCTATACGAGCACACGTGAACGTGCCCGAGGTTGGCCAGAGAGCTTGTTGTCTCTTCAACCTGTTGTTGGGCAACTTGTCCGATGAAACGGACATACCTTTTTTCCAAGTCTGTAACTGGCGGCCGCTTTCAAATACAAATCAGAGATTGCAACCTTTTAAGGGATTTTGCAACACAGTGTTTCTTAGAAGTCCTGAAAATATTGCTATTCGAACTGGTTAAACAGTTTCGACAGTTAACCATTTAAATCCGCATTTCCATTTTTTATGGGTCCTTATTAGGGTCAAAATCAGTTTTATAGCAATGTTACAAAAGTACGTCTATTTTGTAGTTAATTCTCTTATTCTTTTGGTCATCTGCTATACAaattctgattggataatcAATCGCACGTGACTAGGAGATGTGGGTGACGTACATCTTATGTGCGTCACGCTGTAGCCCAGTCCTTCTGTCGGCTTACCAGAAGTGGCATGACCAATCCCTTGAATTGTCACGCACTAACTTTGTCGACTTGGTACTGTTTGGTACTGTTATTGCAACAAGATTCTTGAATTTGGGGATAAGGTTTGATAGAACTACACTATATCGGTTTAACTCTTGTGTCATAATTTAcatttttcaatcaaaatatttcaatattttgatCTATGAACACCACGTCTTCATTACTTTTGAAATCATTAGCGTTTGTTGACTTCCAGGTTGTTAAGGAAAGGTATTATTACGTTCAGAAGTGCTACCGACAGATTTAGTTATTTATATAGCCTTGTACATAGTCCTCAATAATCGTTTGTAAATTTTCTCAACCGCTTGCCTGTCGTATTGTTATCGTTCTTCGTCGTATTTCATCACCTTTATCGTTTAGGGGAACACCTTCAAACATTTTCTGTAAAAGCTGTTTAGTGGATCATTTGCCGCCTTCAAGCATTTAAGTCTTGTGAATAAATGCGCGAATAAAAAGAATAGTTTGAAAAAGTGTCAACTACTTGCACTGTGGTTTGGTGGCTTGTAAAACAGGTTATCAAATTGGCATTGTCTGTTATCGTATTtctcgctctctgattggttcaccGTACACAGGCTACCCACATTTACCTCTACATCTACATTTTGTTATGTCGGTAAAATCCGTAAGGATATCGCACCAACTGAACAAAATGTTACAACTATGTAAAAGTAAATACAATATATCAAATtaaaaaagccgaaaaaaaaaagaattcaaggacggtacctcctaataccgagtttttttttttttttttttttttacaaaggttatgactatggggaaaaggcaGGTCTtggcaagggttattggaatctaaaaagaaaaatgtgggtaaccacgcatttttgaGAGAGAAtcaagcaaccataattctgaaaaagcgttaaaatacaaagagtgtagggcaatttctttccaaatttaaggtgattcccttcaattgcataaCGCATCCTTTCTTCCCATCATTTCTTGCgtcgcgcgcaccttcggaactttacaggttttctatgaaagctgagctgttcagagaaataaatggtccttttctcctaaacgaactcggtgacccccattttttaatacataaattcaaatggcatacggtctagtacaatatatcgcgattttgagaaaagttaaaaattctgctttgagatatttttattgaaatgccgaaaagaacacgtctttaggtgcagcatagtatgtacgctcgccgcaatttttaaaatttatttcataatcttgattcctgttcaactaatatagtatacaatacaagataatggtctgttttgttgaactgctccaatatttcaatacaagcaatgacttttcaaagcaattatagttttcatttctgattactggggtttctcaggaaaaccttgcgggtcgtatagttgctattaatgtctatccattttgtgaaaaaaaagcacggtgacccctactttttattgcatttttgaaagtttctaaacataattaccaactggaccaagttttagaaaattttaaatattccttctatttcgatggaatcaccttaagctcaattatctctgaaaaatacgtggttacccccaactttctttttggattccaatagcccttgccaagatctgctttttccacgtattcataaactgcacaaaaatattgttgtattagtgggcaaattccttaactctttcccgtcaagagttgtattttcccgacggtgaagtcgggaaccattgagccacttgtgacgtcatcatttttgatgtcagcaaattgttttgataagcagctaacacagcaagggtagatccatccatacgtgtgtccaatTGGgacagagctataccagaaaaaacgtgtccaattttgggtgcaaag

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02375 all species →	JmjN	jmjN domain	Family	Interproscan
PF02373 all species →	JmjC	JmjC domain, hydroxylase	Domain	Interproscan
PF08429 all species →	PLU-1	PLU-1-like protein	Family	Interproscan
PF01388 all species →	ARID	ARID/BRIGHT DNA binding domain	Domain	Interproscan
PF21323 all species →	KDM5_C-hel	Lysine-specific demethylase 5, C-terminal helical domain	Domain	Interproscan
PF00628 all species →	PHD	PHD-finger	Domain	Interproscan
PF02928 all species →	zf-C5HC2	C5HC2 zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR019786 all species →	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR003349 all species →	Domain	JmjN domain	Interproscan
IPR003347 all species →	Domain	JmjC domain	Interproscan
IPR013637 all species →	Domain	Lysine-specific demethylase-like domain	Interproscan
IPR001606 all species →	Domain	ARID DNA-binding domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR048615 all species →	Domain	Lysine-specific demethylase 5, C-terminal helical domain	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR047970 all species →	Domain	Lysine-specific demethylase 5A, second PHD finger	Interproscan
IPR036431 all species →	Homologous_superfamily	ARID DNA-binding domain superfamily	Interproscan
IPR004198 all species →	Domain	Zinc finger, C5HC2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10694 all species →	LYSINE-SPECIFIC DEMETHYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0032452 all species →	Molecular Function	histone demethylase activity	Interproscan
GO:0034647 all species →	Molecular Function	histone H3K4me/H3K4me2/H3K4me3 demethylase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11446	KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylase	EC:1.14.11.67	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_61122-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

68TPM > 0

7Conditions

163.6Max TPM

57.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	16	60.00	116.37
holobiont · low.pH Control.temp	20	14	45.09	134.33
holobiont · control.pH_high.temp	20	17	59.81	163.58
holobiont · control.pH Control.temp	19	15	57.48	129.23
Whole organism	4	4	97.38	101.42
unannotated	1	1	42.56	42.56
live coral tissue/skeleton	1	1	43.08	43.08

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	116.37
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	115.99
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	112.02
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	103.02
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	95.46
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	88.64
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	86.04
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	75.06
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	70.12
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	68.52
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	65.65
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	59.74
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	50.04
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	44.81
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	30.70
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	17.94
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	134.33
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	106.36
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	82.20
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	76.58
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	69.11
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	68.62
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	55.81
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	51.57
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	47.33
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	45.55
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	44.53
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	41.37
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	41.02
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	37.36
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	163.58
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	124.12
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	121.83
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	101.32
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	91.73
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	78.17
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	76.78
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	76.71
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	60.28
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	58.40
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	52.01
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	50.11
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	47.01
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	33.73
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	30.50
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	16.14
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	13.73
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	129.23
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	127.58
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	101.01
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	93.63
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	90.23
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	81.41
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	71.01
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	70.89
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	62.82
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	59.99
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	54.04
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	52.36
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	48.82
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	27.55
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	21.58
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	101.42
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	98.62
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	97.08
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	92.40
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	42.56
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	43.08

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.