Gene detail

Detailed information of HK74SY85_g1104 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg4:4751457...4753468
NR annotation: XP_031574009.1, S-antigen protein-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g1104

ctgcctttaacaggagtgtctaccttacagggctgtccactttgtgggagttcactgtaCAATGCAATTGCTGCCATTGTCTTCCAAAATTACCTTTGTTACAATGTAGTTATACTTTTACTGATATTTTATGTTACTAAGAACCTACGCACAGCCCCACAATCAAAAGACCAGACATTAACAAGAGGTTAGTACTACTAACTGATCTTTAAACCTTCGAATATCAAAGTAGCATATATGCATGGATCCTGAAATGTGAGACTCAGATACCAAAAATGTATACAATGTCCTCAACAAAGTTTACCCCCCGTGGTTGTTTGCTACCAGTTTTTTGATGGTGGTAATTTAGAATGACCTGGAAAGAATTAGAAAATCTCTGCTGACCAAAGAATTTGCATTGAATTTTCATTGGTTGCTGGGAATCATACCAATGTAATTATTGAATTATATAATAGCAAAATGTCACAGTTGAATTTAGGTAATGATACAAGGTTTTATTTATTTCTTCCAGGAAACTTGGCTCTAACTAGAAATGTAGAGAAAGGACGTCCAGTGAGAGTTATACGGGGATATAAACTAGACAGCCCTTTTGCACCAGATGAAGGTTATCGTTATGATGGTCAGTATCATACTAGAATATATTATTATATATATAATTAAATTATCATCATTTGGATAGCTGTCattattattattattattattattattattatacaagcttatatacaagcttataaaatctagtaatacaagagaaatcagaataagctattaaaatctatatatgactagtgcgtagtgttcaaagtagtggagcttttgagttgaccactacttcggtacattttaaatacaACGAGGGAAGAAAGACAGTCTCTCCTTACATGTAGCTACTCACAATATTTATTAGTGCATTTTTGATCTGTTCATTTATCCAACAATTTGACATTCTTACCTTATGTCATTTTCTTTCTGAAGGGATCTACACAGTGGAAAAATACTGGCATTCTGTGGGACTGAGTGGATTTATGGTCTTTAAGTTTGTATTGAAGAGATGTGACAACCAGACACCTGCAGTTTGGGGCTTTGAAGACAATACCAATGTATGTCACTATAGAACATTTATCTTAAATATCGGTGTGGTCAGGGGAAAAATTGGGGAAAAAACCCCAGATCAGATGAAAAATTGGAAGAGAGGGGGATATAACACGGAACTTCTCCTTAGGGGTTTGCCAAcactggtttaaatgttcagggcattggtttactgtacttccataatcaacacactagtttggtcctttaaaacttttctaatcacgttaagttacccgccataaaacattaaacaaataaaactgccttgaacaaaatttgaaccagtggCAATAGCTACAGCACGATGTATCGATAAGGGAGTTAACGTGGTCAGACTTAATCCCCCCACTCGGTCAACTGGCTATGTGCCTGTTAACTCATTTTGCAAATGTTCGAATGACCATCTTACAGCATTTCTACAGTATTTACAAAATAACCCTTGTGAAAATAACCCTACTACCTGAGTTACAAATTTGCAATTGCGTTTCTTGAAGGATTCATGTTCCGAGGAAGCATCCGAGAATGGAATTACAGAAAAATTGCCAAACAATCCGCCATCAAAGGACCAAAAACTTGACAACGGAAACTCTGACGTCACAAATAATGACGCTAAATATGAGAACAGAGTCGGCGATGCAAATGAAGTGGAGAAAGAAAATGAGATTGAAGAAATGGAAGAAGAGAGTAATAAAGAACATCAAGAAGAAGATGATGAAGTAAGCGAGACGAAAGAACTTGTAGCTGATGATATCATTCACGAGAACGCTGTCAGCGATGCCAATGAGAATAAAGAAAATGACATTGAAGAAATAGATAAAGAGGAGAAAGATGGCGAGTGTAACGAGGAACATGATAATGAAGTAAGCGAGACGCCAAAAGAAACAGAAGGTTTAGACAACAAACAAGACGAActgcctttaacaggagtgtctaccttacagggctgtccactttgtgggagttcactgtaCAATGCAATTGCTGCCATTGTCTTCCAAAATTACCTTTGTTACAATGTAGTTATACTTTTACTGATATTTTATGTTACTAAGAACCTACGCACAGCCCCACAATCAAAAGACCAGACATTAACAAGAGGAAACTTGGCTCTAACTAGAAATGTAGAGAAAGGACGTCCAGTGAGAGTTATACGGGGATATAAACTAGACAGCCCTTTTGCACCAGATGAAGGTTATCGTTATGATGAAGGGATCTACACAGTGGAAAAATACTGGCATTCTGTGGGACTGAGTGGATTTATGGTCTTTAAGTTTGTATTGAAGAGATGTGACAACCAGACACCTGCAGTTTGGGGCTTTGAAGACAATACCAATGATTCATGTTCCGAGGAAGCATCCGAGAATGGAATTACAGAAAAATTGCCAAACAATCCGCCATCAAAGGACCAAAAACTTGACAACGGAAACTCTGACGTCACAAATAATGACGCTAAATATGAGAACAGAGTCGGCGATGCAAATGAAGTGGAGAAAGAAAATGAGATTGAAGAAATGGAAGAAGAGAGTAATAAAGAACATCAAGAAGAAGATGATGAAGTAAGCGAGACGAAAGAACTTGTAGCTGATGATATCATTCACGAGAACGCTGTCAGCGATGCCAATGAGAATAAAGAAAATGACATTGAAGAAATAGATAAAGAGGAGAAAGATGGCGAGTGTAACGAGGAACATGATAATGAAGTAAGCGAGACGCCAAAAGAAACAGAAGGTTTAGACAACAAACAAGACGAA

Protein

Uniprot

Uniprot term	Description
J9VHE9	UHRF1-like protein OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=UHF1 PE=3 SV=2
F6UA42	E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis OX=8364 GN=uhrf1 PE=3 SV=2
Q7TPK1	E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus OX=10116 GN=Uhrf1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02182	SAD_SRA	SAD/SRA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003105	Domain	SRA-YDG	Interproscan
IPR036987	Homologous_superfamily	SRA-YDG superfamily	Interproscan
IPR045134	Family	UHRF1/2-like	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14140	E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0010216	Biological Process	obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan