Gene detail

Detailed information of HK74SY85_g16332 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg152:581612...585312
NR annotation: XP_020903128.1, calumenin-A [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g16332

ATCGAGAACGTCATTAAGAAATACATCGTTAGTGAAGGCAAAAAGTACATGCCTAAAATAGACAGTGACGAGGACGGTCATGCAACCTGGGACGAATTTACAGTTGCAGCTGGATACACTAAAGGTACTGATGCGGGTATATGgggggaggggaagggaagtgggggtgggggtgggtgaagggcggACTTCCCTTCCCCCTACTCCTTCCCGTTCTTTTTACACCTTGCCTTCTCCCCCTTAGGACCAGCTACGCAGGCTATGATGGGAGTGGGGCAGGGGGGACGGGGAGGGGATGGTAGAAAGATGGGCGCGGCCTTCCCTTGCTCCTTCCCCTCCGCTTTCCTATAAGGCGGACACCCCTGATGATGATATTGATGCTAGTTCTACGAATGCGCGCAATTGGTTGAATTATATCTGATTACGTTGCTTGATTTTTGCAGCCTCGATCATACGTTGTAttactttcgggggatcgttactttcgaggggtcgctactttcggagattGAATTTTGTTTAAAATGCCTAACGGTAAAGCTAGTTCAACCGAGTTCAACCAAAAACGATGCAACAGTCCTAATAAAAACCCAATCATGAATCGTTTCTTTCAGGTGACCAACCAGAACCCAGAAAAAGCTCCACAGGAAGCAAGAGACGCGACAAAGAAAAGTTTGACTTGTCAGACATGGACCATGACGGCAAACTGACTTACTCTGAACTGGGTGTTATGATCCACCCTAACGAATCACCACATATGAACAATATTGTAACTTCTGTACGTATTGATACATCATAAAACTAAGTGCTAAGTCTGTATATATCATTGGGCTGTGCTTATGCTTTTATCGCTTGTGAAAACCATGAGTTGATCAATCAAAAGCTGTAACAgtgtatcgtgtatcgtgtcgtgtatcgtgtatcgtgtctacacgtgtcgtgtatcgtgtatACACCTATTTAAAAAACGTTGTCGGGTATGGGTAGAAACTACTAAAATTATATAGATTCATTCTGCAAATTTATTTTTTTTCATCCTGCAAATGCGGCCACCTCATATCACGATAGATAGCTGTTTTCGCAGGCTAACTCATGCAGGGCCATATATACACATGAAAAGACTTTCGTTTGTATGAGTATTGTATTTTCAATTGTATACGGCAGGAATTCTTGCACTTAATGGACAAAGACAATGATGGCAGGGTTTCAGCCAGAGAATTTTCGGGTAAGGGAATTTTATATCTGCTAGAagcatatcattaccaacagtcagcatcatcatcattatcatcatcatcatgattatcattatcattatcattatcatcattatcattatcattatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcattatcatcatcatcattatcattattatcatcatcatcatcatcattatcattatcattatcattatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcattatcatcatcatcattatcattattatcatcatcatcatcattatcattatcatAGTAGTagtagtttgatcctccatgacctcacacacttgtttcaacgtctttctaatctgtgtaggtcatttaagctttttaatagttccgtaaaactgagcactgatggagagaggggagtaaagtgcgcaccgtcggcctcaagtttatcagtcgagagactgttataattacgagctaccgacgttaaataaggttactttaccttttatcatcttcatcattatcataactacatgaccatcatcatcaccatcatcttcatcataactacatgaccatcatcatcaccaccatcatcatcatcattatcaccatcgtgattacgatgatcctcctcaacatAAGTCTTTTGGTTTCAAAGGTGGAGACTCAAGTGCAGAAATGGATGAATCATTTAAAGAAGTCGATAAAGATAACAACGGCCTGTTGGATAGAGTAAGTTAAGTTGGAAAGAGTTGAGCTCGAGAGGttattcttcttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctatttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctgatctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttctacttagtctacttctacttctacttccacttccacttccacttccacttccacttccacttccacttccacttccacttccacttccacttccacttccacttccttcttcttcttctacttctacttctacttctacttctacttctacttctacttcttcttctTTTCTTATCTCGAAAAATTTAAATTAATAAATATATTGTCAATTATTTTGCATCCATGTTTTGACAGAAAGAAATAACAAACTGGATGTCGCCTCCTGAGAAAAACCCTTTCGTTCATGAGGCAGAGACGCTAAGAGAAGAGATGGATAAGGACAGGGTACGTTATACGTACATAGTGGTTTATAACTTACTAGCTCTTCCCGTCTTCTtatacacttattttaaaaaacgttgacaatcggacaatcagacaatcggaaatggtcgatctgagaccgtgtaacaagctgcaaattttaatattttcacagccgaacaacgtatagtttcctaatattggaatataaggcatgacctttgagttagaattgtgctttttcgtattttagccagaaaacataaaagcataaaaattctgtttagtcccagatcgcccatttcagattgtccgatgtcaacgttttttgaaatagatgtatCCCTGCACCCTCGAGTTGCTAAAACAGCCCAGCTAATAAATCCCTCCCACCTGTCCAGATTTCACCCAAGACAACATTATTTTCCTCTGAAATAATCAGTCGTAACGAAACTCAACCCATAACGGTTGTACCGGTCCCTCATTCATACACTCACCAAGCCCCAACTAATCCTCCATAGTCTTGTGGTTATGCGATCGTCAGCTTCATCCTGATACTCGACTAATCCTGGCCCTTCTTCAATATCTCCTCTTCAACGCATCGGGGTGGTTATAGAGTTTCTTTCTCAACATCCCCCTAACCCCCATGcactccactccaccccatccctcgaccccTGTCTCATATGATCTTCTTTTATAGCAAAATTGCATTGCAAAATTTGgctatcaatagacgtcatttccgctctcttgacatgacagcttttcaatggcctactctcttgttgatagtacacgaagctaatgtttgttcatcatttgaaaaTCAAACAGGAAAAGAATGATAATGTTTATATAGATTTATAACAACCTTATACTCACAACTTTCAGGATGGTTTTCTTACCGAAAAAGAAATCTTCAAACACTACGCTAAGTTCGCCACCAGTCGAGCAACGGTATACGGCAGACTTATTCGACCAGATAGTGATGACGATGAGCCAAAGAAAGTGAAAAAAGAAGAAATGGGAGAAAATAAAACTGAGAAAATCGAGAACGTCATTAAGAAATACATCGTTAGTGAAGGCAAAAAGTACATGCCTAAAATAGACAGTGACGAGGACGGTCATGCAACCTGGGACGAATTTACAGTTGCAGCTGGATACACTAAAGGTGACCAACCAGAACCCAGAAAAAGCTCCACAGGAAGCAAGAGACGCGACAAAGAAAAGTTTGACTTGTCAGACATGGACCATGACGGCAAACTGACTTACTCTGAACTGGGTGTTATGATCCACCCTAACGAATCACCACATATGAACAATATTGTAACTTCTGAATTCTTGCACTTAATGGACAAAGACAATGATGGCAGGGTTTCAGCCAGAGAATTTTCGGGTGGAGACTCAAGTGCAGAAATGGATGAATCATTTAAAGAAGTCGATAAAGATAACAACGGCCTGTTGGATAGAAAAGAAATAACAAACTGGATGTCGCCTCCTGAGAAAAACCCTTTCGTTCATGAGGCAGAGACGCTAAGAGAAGAGATGGATAAGGACAGGGATGGTTTTCTTACCGAAAAAGAAATCTTCAAACACTACGCTAAGTTCGCCACCAGTCGAGCAACGGTATACGGCAGACTTATTCGACCAGATAGTGATGACGATGAGCCAAAGAAAGTGAAAAAAGAAGAAATGGGAGAAAATAAAACTGAGAAA

Protein

Uniprot

Uniprot term	Description
I6L9G5	Reticulocalbin-3 OS=Rattus norvegicus OX=10116 GN=Rcn3 PE=1 SV=1
Q96D15	Reticulocalbin-3 OS=Homo sapiens OX=9606 GN=RCN3 PE=1 SV=1
Q8BH97	Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10827	RETICULOCALBIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan