Gene detail

Detailed information of HK74SY85_g17152 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg168:147161...150334
NR annotation: XP_020893101.1, ras-like GTP-binding protein Rho1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g17152

GTAATGAATAGTACGACGAAAAAGAAGATCAAGGTTATTTTTATCGGAGACAGTGAATGTGGAAAAACAGCGCTTTTGAGCGCGTTCGTGAAGGACATTTTTCCTGAGGTAATTCATAAACCCGCTCGTTTGTGAAAGAGTTGTTTAATCTGGTACTTTAACCTCTCGTAAACTACAGTAATTCATCTTTCGAAATTATTCATGTTTGGTTAATAGATTTTATTTTATACGTTCTCTTTGTACAAACATTTACAGTTGTTGTTCTAATCAGTACAATTATATTTTCCTTGGAAATTGGTGAACAgtttgtttgtaatgtttgtcactgatggttttcgcgtctgtttttctgtttgtttgtACAGGAGTACGAAGCTACGGTTTTCAACAGTTTATCCTCCGAAGTAGAGGTCGAAGGGGAAGCTATAGAGCTATCCTTCTGGGATACTTCAGGTTAGATTAGTCATTTAGATAGCCGTCGTTAATTTGACGCAAGTTGACCCGACCACCAGTCAAAACTTGATTTCAAATCTAAGCTATTTTGTATGCTCATTAAAGTCATTTGCTTGTATTCTCGCTTTTCACACAAAGGAATATCTCAACAGTATTTTAGCAAAAAGCTTATTATGGACAGTTTTGATTTTCGAGGAGACATTCCAATTGAGATAGGATTATAGCTCTTTGGTAGTGTGAAGAAAGTGTGAAGGATATTTACACACATCACGTAGCGATCGGATCATCGAAAGGCCTTTGGTTTTGTGGCGACGCGTGCCGTGAAATCAACAACCATTATTGTTCTGTCTAGCTGATCATTTTTTTGAGCTGTTAAAATCGAGCTGAAAGTCCACATCCTTAATCTTCAAAAATATACTAAATTAGTAACATTTTGTATTTCATGGGTTATAAGCTTATTGTGTAATTATAATTTGTTTATGGAAATCATTGTATCACATGATTGTGCAATTGCataattaatatttaagagtataaacttttattttaaatatttTGTTTGTTTGTTTTCTTTGTAGGTCAGTCTGAATTTGACCATGTTCGACCATTATCCTATCAGGATACAGATGTTGTGGTATTATGCTTTGATATAAGCAAGCCAGAAACTTTAGAAAATATTAATATCAAGGTCAGTTGATTAATAAGTTGTTTGTCtatagacccctagcttacaataattcccagtctgggggacaaaacaatgagaaattttgcataagaaaagttttcaattctcaggagagagaattagaactattgttttgtcccccagCTGAATAGTATGTATTTATGACTAATGTGTTTATAATCCGATCCCTGACCTGCTTTTATCAAACTATATACACCTATTTCAAAAAACGCTGGCatctgacatctgaaatctgacatctgaaatctgaatctgaaatctgaGccaagaggaattgttggtgtgagttgtgaattttaattataataacttatgacgaaccagctgtgttgGTTGGTATACTAAGAAAGGCATTTTTCATTTTTCATGAGTCTTATTCGTTGTTTTTATTTCTGcccataatccattgcggtcacagattcagatttcagattcagatttcagatgccaacgtttattgaaataggtgtataaccctgattgagagaaagctgaAATGGGATGCAGAATATGAATTCCCTGGAATTTCCCATTTTATATTCCATTCCAAAAAGATCTACTGATAATAGGCTTACTGTTTTTTATTTCACATAAAAATATGTACCTACACAAAATTAGTTAATACAATCATGATATTGTGCAAACTTGCAAGTTATTACTATTTCATTAAAAAAATATAGCAACTATGTGTagctgtggtatcacaaagtttaaatatcacctaattatatccaatttgaaatcttcttgttaaacttatatcgaagtacaaataactttttgccttttgtagttatatttacaaccacattttaaaaagggtattatttgaaaggtgataccacagttcaagtttcccagtttgggttatggatagctggaatggGCCATTTGGAGCTAATGGCACTGAAATATGGAGAAATTTGAGAGATAGGGATAGAGGAGGCTGCTTACTTTTCTCTTTCTTTATGAATTAGCCTCAGGGGGTGGGTGTGTCTTTAAATGTTTCAATCATACAATGAACTTGACCTCTATTAGGACCTCCCTTGGGACCAGCTGCCTTAGAGCGTGGTGTCTGCCAGGCAAGAGAATTCGATCACCAGACACATGAGCTAGAAAGACAATTTAATTGCTTGTAACTTGACCTGTGCAATATATTGTGTTTCATTCATACAGTGGGCTAAAGAAGCCAAAGAAATGTGTCCTGATAAGCCTTCAATCCTTGTTGGCTGTAAATCTGATCTAAGAACTGATATAAGTGTTATCACAGAGCTGGCAAAAAGTAGACGAATACCAACCACATACCAGCAGGTACTGAATTGAAATCAAAACTTAATTGTCATCATCATCTTTCATTATTGCCTCTTTAATAATATTAACTGCAGaatggaccacattcaagatctgaaatatacggcttgatactgtggctTATTATTAGCCTCCTCCTCAGGTGACTCTCTAACAACAGGGGTTGCCTGCGGAGGAGGCTAACTGTGTATAtaccaggaataaaacaaaagaaatttatgacatcatacctcaagagaaatagaatgtatcaagctttatcaaaatctttgagatctcgaacatggtctattGACTCAGATTTCAATTTGTTATAAGACTTCTGTGATATTGTATtttcttaattctttcttcctttttttctttctttctgtctgtctgtctttctttcAGTATCATTTCACTTCACCTTTCTTCATTTTTATGGAAAAGTGAAAAAAACTTCAAttctacttcattccttttttttcttcttattttcttcCATTATTTTTACTTTTCAGGGCTGTGACATGAGCAAGCTAATCAATTCTGTAATATACTTAGAATGTTCAGCCAAAAGTAGAGAAAGAATACAAGATATATTTGAAGTGTGTGTATTAGCAGCTTTGAAGAAACCATTTCGTAAAAAGAACTACAAACCCAAAATTAAACCTTCTGAGAAATCACTTCAGAAAAAGTCTAAAAAGTGTATTGTTTCAGTAATGAATAGTACGACGAAAAAGAAGATCAAGGTTATTTTTATCGGAGACAGTGAATGTGGAAAAACAGCGCTTTTGAGCGCGTTCGTGAAGGACATTTTTCCTGAGGAGTACGAAGCTACGGTTTTCAACAGTTTATCCTCCGAAGTAGAGGTCGAAGGGGAAGCTATAGAGCTATCCTTCTGGGATACTTCAGGTCAGTCTGAATTTGACCATGTTCGACCATTATCCTATCAGGATACAGATGTTGTGGTATTATGCTTTGATATAAGCAAGCCAGAAACTTTAGAAAATATTAATATCAAGTGGGCTAAAGAAGCCAAAGAAATGTGTCCTGATAAGCCTTCAATCCTTGTTGGCTGTAAATCTGATCTAAGAACTGATATAAGTGTTATCACAGAGCTGGCAAAAAGTAGACGAATACCAACCACATACCAGCAGGGCTGTGACATGAGCAAGCTAATCAATTCTGTAATATACTTAGAATGTTCAGCCAAAAGTAGAGAAAGAATACAAGATATATTTGAAGTGTGTGTATTAGCAGCTTTGAAGAAACCATTTCGTAAAAAGAACTACAAACCCAAAATTAAACCTTCTGAGAAATCACTTCAGAAAAAGTCTAAAAAGTGTATTGTTTCA

Protein

Uniprot

Uniprot term	Description
P61587	Rho-related GTP-binding protein RhoE OS=Homo sapiens OX=9606 GN=RND3 PE=1 SV=1
P61588	Rho-related GTP-binding protein RhoE OS=Mus musculus OX=10090 GN=Rnd3 PE=1 SV=1
Q5R9F4	Rho-related GTP-binding protein RhoE OS=Pongo abelii OX=9601 GN=RND3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR003578	Family	Small GTPase Rho	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24072	RHO FAMILY GTPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07859	RND3; Rho family GTPase 3	-	GTP-binding proteins	ko04031	deepkoala