Gene detail

Detailed information of HK74SY85_g19580 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg219:209908...212042
NR annotation: XP_031559582.1, bifunctional polynucleotide phosphatase/kinase-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g19580

ATGGAGTGTTTTCTACATTGCTGTAACGATACACACGATCATGTAGCCTTACCAGATGGGAAGGAAATTATAGTGGGTCGAATGCAAGAATTTCAAATAAAAAATCCAAAATGTTCCCGCAATCAAGGTAATTTAGACTTCCACCAGGTGTAATTCCACCAGTAAATTTCAAAAGGACAGTGTATGATCTTGTGAGCTAAGATTTACAGTATCCGAGGCTTTTTATAAAGAAGCAGATTCAATAATTATCAATGTCTTTTCATCCAAAGTATTGATAGTAGTTGCTTTTCTTACtgatgatgatcagtgatgacgataagcataaatgatgatgatgacatactgacgatggcgaatgataattatTGGCACCTGAGAAATCTGAAAAGCAGACTAACATGTACCTAACAATTAAATAACTTGTATTTTATTTTATAAATAGATAATATATTTTAATATAATTATGTATAAATGATAGCTAATTATAATTAGTGACTATATACATAAAGTGGCTTTTCAATATCACTTTTCAGTCCAGTTGAGAGCAAACTATAAAGAAAGAGAGGTTGAAGTCAAGCAGGTATGATAATTAACATGACTGATCATATACATATCAAAACGTAGTTAAAAAATTGATTGAATAAAATATGAATGAATGGATGGATGTCATGAATGAGGGAGTAAATAAATGAGGTGAATGATTGATATGAGTCATATGATTGAATGACAAAATATTTCCTTTTTGTATTATTAGCTCGGCAAGAATCCTAGTACCATTGGTGGACAGGAGGTCAAACAAGGAGAAACCAAAATTTTGGGTCCAGGAGGGAAAATTTGTCTACTCCATAATGATTTCCCACATTTTATTTATTTCAAAATTGCACCAACAGCCAAATCTCCTCAACAAAGTTTACGTAAAGATAATGGTAATGAATGCAATCAGAACCAGGTTTCTGTGTCTGGCAAaaatagaaagagaaagataaaagatgatgaggaagaCACTTGTGTAAAAGTTAAGAAACGTAAAAGTGATTCTAGTGAAAAAACAATTCTAAATGTCATGACTTACAACAAAGTTGAAGGTAGAGATGTTGTTAAAGACATATCTACAGACAATGGTAATGAAGGCAACCAGAACCAGGCTTCTGTTTATGAGAAAAATAGGAAGAGAAAGATAAAAGATGATGAACCAGACACTTGTGTAACAATCAAGAAAAGTAAAAGTGATTCAGTTGACAATGAAAATGATGACACTTCATCAGCAGTAGGAACACCATGTGATTCTAGCACATGGGAAGAAATCCCAGGAGAGTTGCTTGTGTACACCAGGGAGGGAGTTGAAGGAAGATCTAAAGTAGGTATCTAAAACCAACTGAGTGAAGTCTCTCCCAAGAGATACCTCTATGATAGAAACCATTTTACTATAATCACTGCAAAATGAATTCCAGTCACTTTAATAAATCAACCCTATAAATTGAACACCTCTAGTATTAaaggggtgtttacacgggcgattttgtcgcatgactttagcggcaactttatcgcagccaagtcgcttgatcgctgccttttcgaacatgctcgaaatttagtgcaacttttattgcgcgacaaaatcgccgactgtttacacacgaatctgactacttttacatttcaaaatcatttgacaacatgttaaaacaaccaggcacacaaaggggaaaccctggcatgattttatggaagaattttcacaattgctgccatgttatcaatgtcagatgattttgaagtgtaaaagtactcagattcccattctgcattgcgagcttcaaattcaaaatggtgcttgtgcacattgcctTTGTGCTGTGGTTTTCCACTGTGAATCATACATACAGTAATCTGCTCTAATGTTGAACAAAATTGAATTATAGTTGTAAGGTGTTCCCACATATATCTAACCTCTATCAAAATAGACATGTACTTACAGATTATATAGTGAATGTTCTTGTCATATACCACAACATGATAATAATAATATAACTTTATTTGGATAAACATGATTCATTCAGATTGCAGGATTTGATATGGATGGTACACTGATAACTACAAAATCTGGAAGAGTATTCCCCACAAACACAGGAATGGAGTGTTTTCTACATTGCTGTAACGATACACACGATCATGTAGCCTTACCAGATGGGAAGGAAATTATAGTGGGTCGAATGCAAGAATTTCAAATAAAAAATCCAAAATGTTCCCGCAATCAAGTCCAGTTGAGAGCAAACTATAAAGAAAGAGAGGTTGAAGTCAAGCAGCTCGGCAAGAATCCTAGTACCATTGGTGGACAGGAGGTCAAACAAGGAGAAACCAAAATTTTGGGTCCAGGAGGGAAAATTTGTCTACTCCATAATGATTTCCCACATTTTATTTATTTCAAAATTGCACCAACAGCCAAATCTCCTCAACAAAGTTTACGTAAAGATAATGGTAATGAATGCAATCAGAACCAGGTTTCTGTGTCTGGCAAaaatagaaagagaaagataaaagatgatgaggaagaCACTTGTGTAAAAGTTAAGAAACGTAAAAGTGATTCTAGTGAAAAAACAATTCTAAATGTCATGACTTACAACAAAGTTGAAGGTAGAGATGTTGTTAAAGACATATCTACAGACAATGGTAATGAAGGCAACCAGAACCAGGCTTCTGTTTATGAGAAAAATAGGAAGAGAAAGATAAAAGATGATGAACCAGACACTTGTGTAACAATCAAGAAAAGTAAAAGTGATTCAGTTGACAATGAAAATGATGACACTTCATCAGCAGTAGGAACACCATGTGATTCTAGCACATGGGAAGAAATCCCAGGAGAGTTGCTTGTGTACACCAGGGAGGGAGTTGAAGGAAGATCTAAAATTGCAGGATTTGATATGGATGGTACACTGATAACTACAAAATCTGGAAGAGTATTCCCCACAAACACAGGA

Protein

Uniprot

Uniprot term	Description
Q7TQC5	Aprataxin OS=Mus musculus OX=10090 GN=Aptx PE=1 SV=2
Q8K4H4	Aprataxin OS=Rattus norvegicus OX=10116 GN=Aptx PE=2 SV=1
Q7YRZ1	Aprataxin OS=Sus scrofa OX=9823 GN=APTX PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17913	FHA_2	FHA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR041388	Domain	PNK, FHA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12083	BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0046403	Molecular Function	polynucleotide 3'-phosphatase activity	Interproscan
GO:0046404	Molecular Function	ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity	Interproscan
GO:0046939	Biological Process	obsolete nucleotide phosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan