Gene detail

Detailed information of HK74SY85_g22366 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg289:850678...852433
NR annotation: KAJ7383965.1, Ras- protein Rab-1A [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g22366

ATGTCAACTATGAATCCCGAATAGTAAGTCGAAAAACATGGCGTATTTGATGTTTTCCTGTAGCAGTAATGGAGAAGGGAACGATAGCTCGATCTACGTGTAACATTTCAAGGGGTACCTATAATGTCTTTCTTCTCCCCACAGTGATTATCTGTTCAAGCTTTTATTGATTGGAGACTCTGGCGTTGGAAAGTCGTGTCTGTTGCTTCGTTTCGCGGTAAGCACAAGTTTTAAGTCGGTCGTGTACTCACCACCCCAGATGCAACTACAGTATTGCCTAATCATTGGAAACCATAAAATCCGATAATTATACTTATTTGCTTTGAACATTTCTCTGTCATAGGATGATACTTATACAGAAAGCTACATCAGTACAATCGGCGTGGACTTTGTGAGTATATTATAAAAAGCTATCCTCCATAAACTTATGAATATACAATTTATTCTCGTGATTATATGAGCTGAGAGGAGAACTTTGCCCCCGATGCTTCTTCATAAATGTCAAAAATCCATTTTCATTTTTTGCACTCTAGAAAATCCGAACTATAGAGTTGGATGGCAAGACGATTAAACTTCAAATTGTAAGTAGCATTATGCAATAAAATAATTTATTTTCCAATTTTATTGCATATTTGATTCGTGGAAACCCATGAAAAAAATGACGTCTTGTGATATTTATCAGTTAGTCAATGCTGGAACGTTTTGACCTTCTTTTCTTTTGTACTTTTAAAGTGGGATACAGCTGGCCAGGAAAGGTTTAGGACAATCACATCTAGTTATTACCGTGGAGCCCATGGAATCATCGTTGTATACGATGTAACAGATCAGGTCAGTGCTATGTTATAAGACTAGTATATCTGATATTTATAATCGAATCTGCAACGTCATGCCATTACCTAAACATATTATCATCCGTGCATATAACTGGTTTATGTTGTATAACGTAGGTCCAATAAATGTACAGGTCTAACGTACGTTATAGTTCAGATAACTGACCAAATCGATTTAATTCCTACATATAATGTTCATTGCGTTTTGTACCAGTGTACAATTATTGACATTTGAACAGTTATCATTTCAAGTTGGTTGTAAATTAAATGTTGTGTTTACAAATTCACATTGTAATGTGAACACAGGGATTTTACATTGTATTATCCCTAGCAACAGTTGCAATGGGTTTCCAAAAGTATTTTTTAGAAAGTATTTCATGAATTAGTCCACAATCCTTAGTTTTAAAACCTATTTAGGGTTGTGTCTGCTACTTTTCTGTTAAGATCCAAAGTCAATAACAGTTCCTTAAAATAATTAAAGTTGCCCTATAAATAGCAGTGGGTATTTAAGTTGCATTATAAACATTACGAGCTTTACTGACTATGTTTTGTTCTGGCCATGTTTATAGGAATCATTTAACAATGTCAAGCAATGGCTACAAGAGATTGACCGTTATGCTTGTGAAAATGTCAATAAACTCCTTGTTGGAAACAAGTGCGACTTGACAACAAAGAAAGTTGTAGACTTTACAACAGCTAAGGTAGTTAGTTACCTTtttcttatgagtttgaaaaacgtacagcacatactgcgccgtgaccgtgtcaatgccgtgggttgtatgaaaacatttgaaattccgtgcggtggccacgccgtaactgtgcagtgtgtcgtgtttttcacactcgtacgaaatctgctctatCCTTTATCTCTAGTTTGGTATGACTATCCTGTACTTGTTCGTTGTAATCAGTATTTAATGTCAACTATGAATCCCGAATATGATTATCTGTTCAAGCTTTTATTGATTGGAGACTCTGGCGTTGGAAAGTCGTGTCTGTTGCTTCGTTTCGCGGATGATACTTATACAGAAAGCTACATCAGTACAATCGGCGTGGACTTTAAAATCCGAACTATAGAGTTGGATGGCAAGACGATTAAACTTCAAATTTGGGATACAGCTGGCCAGGAAAGGTTTAGGACAATCACATCTAGTTATTACCGTGGAGCCCATGGAATCATCGTTGTATACGATGTAACAGATCAGGAATCATTTAACAATGTCAAGCAATGGCTACAAGAGATTGACCGTTATGCTTGTGAAAATGTCAATAAACTCCTTGTTGGAAACAAGTGCGACTTGACAACAAAGAAAGTTGTAGACTTTACAACAGCTAAGGTAGTTAGTTACCTTtttcttatgagtttgaaaaacgtacagcacatactgcgccgtgaccgtgtcaatgccgtgggttgtatgaaaacatttgaaattccgtgcggtggccacgccgtaactgtgcagtgtgtcgtgtttttcacactcgtacgaaatctgctctatCCTTTATCTCTAGTTTGGTATGACTATCCTGTACTTGTTCGTTGTAATCAGTATTTA

Protein

Uniprot

Uniprot term	Description
P62822	Ras-related protein Rab-1A OS=Canis lupus familiaris OX=9615 GN=RAB1A PE=1 SV=3
P62820	Ras-related protein Rab-1A OS=Homo sapiens OX=9606 GN=RAB1A PE=1 SV=3
P62821	Ras-related protein Rab-1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR050227	Family	Ras-related protein Rab	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07874	RAB1A; Ras-related protein Rab-1A	-	GTP-binding proteins	ko04031	deepkoala