Detailed information of HK74SY85_g2341 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg9:2304735...2308819
NR annotation: XP_020894938.1, endoribonuclease Dicer, partial [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6TUI4Endoribonuclease Dicer OS=Bos taurus OX=9913 GN=DICER1 PE=2 SV=3
Q25BN1Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3
A0A974H8H3Endoribonuclease Dicer-L OS=Xenopus laevis OX=8355 GN=dicer1.L PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02170PAZPAZ domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan
PF20931Dicer_platformDicer, platform domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999DomainRibonuclease III domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR005034DomainDicer dimerisation domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR036085Homologous_superfamilyPAZ domain superfamilyInterproscan
IPR048512DomainDicer, platform domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0004530Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006309Biological Processapoptotic DNA fragmentationInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10884XRCC6, KU70, G22P1; ATP-dependent DNA helicase 2 subunit 1-DNA repair and recombination proteinsko03400deepkoala

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