Gene detail

Detailed information of HK74SY85_g23686 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg330:718881...721296
NR annotation: XP_020917802.1, S-methyl-5'-thioadenosine phosphorylase [Exaiptasia diaphana]
Species abbreviation PXISH · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

HK74SY85_g23686

ATGGGAAAGATTCATGGAGTGGATTGTGTTCTCATTGCAAGGTAATTTAATTAACTTCCATAAGTGAATCTACAATCTGCCTTCTGGTTTAAGCATCAGTAGTCATCCTGAAGGTCTgccagaccaacactcaaggtctttaaataactgatgaaaaggtgctacagttttaattacatctgcaaatTTGAACTATTTATTTTGCACTAAATTTAATGGATCTTGGATATAATACATGCACTCTGTATAAGCTTACAGAAATACATTTTAACAGTATAATACAAATCTAATATTTTCATGTTTGTAGACATGGTCGAAAACACAGTATCATGCCAACCGACATTAACTACCGTGCTAATATCCATGCACTGAAACAAGAGGGCTGTACTCATGTTGTTGTTACAACTGCTTGCGGATCATTACAAGACCATTTTAAACCTGGTGACCTTGTATTCCCTGATCAATTTATAGACAGAACAACTAAGAGAGCATCAACGTTCTATGATGGTAAAGAAGGAAGTCCTGAAGGGGTGTGTCATATAGCACTGCATcaaccttactgtcctttaacaagacaggtaggaagaatgaagcacgtacccaactatattctaaccaagtaccccacccccacccctccaggagatctctgccagcactgatggcaacctcactgtcctttagcaagactggtaggaataacgaagcacgtacctaactatattctaaccaagtaccccacccccacccctccaggagatctctgccagcactgatgAAAATCTAATTTTAACTTTAACAGATTTTGATAGAAGTTGCGCGTGATCTTAAACTGAGTCACCATGAAAGTGGTGTAAATATCGTCATTGAAGGACCACGCTTCTCATCAAGGGCAGAGAGTAAAATGTTTCGTTTATGGGGTGGTGACATCATCAACATGACGGCAATACCAGAGGTTGCTCTAGCCAATGAGGCAGGGTTGTGTTATGCTGCTATTGCTATGGTAACTGATTACGATTCTTGGCACGATGACCATGAACCAGTAAGTCTGTTTCAAACTGTTGCCATGGTTTTGTGTTGTAGATTGTTGCTATGGTTATATGTTGTCATAGTAAAATGTCTTTTTAAAAACTGGTTTCTCTCATGACAGCTAACACTATTGTTGCCATAGTTACAAGGACTAACATCATCATTACTTTTGTTGTCATGGTGATCATTGATACTAGTAGTGATAGTTTTTATTTGAGTAGTTAGCTTATTAAtcccacttccgcacacagtatggtaagcaactgtcactaaaacatttggtGTGGGATTTAAAAAGTGGGATTCTACGAGGGTTTCTGCTGAGATCATATTTGGGCTGCACTCGAACTGTTTAGGCAACAAATCAGCAAATTTGTGGGCTTCCTGTGGTTTTGCTCACCACAGGTAGCCCACAACGCTATAAAATCCATGCCTTATTTTTATTACTTTGTATCTTAAAGGTAACAGTTGAAGCGGTTCTAAAGACCTTTAAAGTGAATGTTGCTAATACTACAAAGATTCTACTGGAATGTATACCAAGGATAGCTAAGAAAGACTGGACAGACGTTTTGAAAAAGAAACAGGTATGGTATACTCGATCAGTTATTAGAAACCAAGCGTGAGGTCCATAATGTAAGTAGTTATAGACTGCAAATTAGCCACTCATGGCACACAAAATAAACTCAATCAGTTATTAGAAACCAAGCATGAGGTCCATATTGTAAGTTATAGACCGCAAATTAGCCAATCATGGCATGTGAAATTATTTACCCTATAAAAAACTGAGCTATGCATAAATTACATATGCATGCTCAGCAACTGACATTTCACTCATTGCTGTGAGAAAACAAggactgcagagcaccctaaaaaatggtagggctaaatcaaccataactggaacacacacactcgacgacaggagccttaactttagaagtttatttttgtcacatttcccccaaaaagtggtagggctatagccctacctgccccaccctctccacggtccctgGAAAAGATGGAATATACTGCTAATGTGCAATAATACATTACTAATAAGAGAGTGTATGCTGCTAGTGTGAATGGGTCTTATTTTTCTGTCTTATAcagggactgcgaagcaactttgaaagtggggggggctggaacctaaagtatatatacgaatctagaatttagcttttttttctctcttattttcatttatatatttgaaaaaagtgggggggggggggctatagcccccagcccccgtctccgtggtccctgTTATATGTACATGTGTTAACACAACGTTTGTGCCAAGAATTCATTTTTTTCGTAACGTTAATTTTGTTGCTTTCAGGTTGATTTGAACAACTCCATAATGTTACCAAAGAAATAAATGGGAAAGATTCATGGAGTGGATTGTGTTCTCATTGCAAGACATGGTCGAAAACACAGTATCATGCCAACCGACATTAACTACCGTGCTAATATCCATGCACTGAAACAAGAGGGCTGTACTCATGTTGTTGTTACAACTGCTTGCGGATCATTACAAGACCATTTTAAACCTGGTGACCTTGTATTCCCTGATCAATTTATAGACAGAACAACTAAGAGAGCATCAACGTTCTATGATGGTAAAGAAGGAAGTCCTGAAGGGGTGTGTCATATAGCACTGCATcaaccttactgtcctttaacaagacagATTTTGATAGAAGTTGCGCGTGATCTTAAACTGAGTCACCATGAAAGTGGTGTAAATATCGTCATTGAAGGACCACGCTTCTCATCAAGGGCAGAGAGTAAAATGTTTCGTTTATGGGGTGGTGACATCATCAACATGACGGCAATACCAGAGGTTGCTCTAGCCAATGAGGCAGGGTTGTGTTATGCTGCTATTGCTATGGTAACTGATTACGATTCTTGGCACGATGACCATGAACCAGTAACAGTTGAAGCGGTTCTAAAGACCTTTAAAGTGAATGTTGCTAATACTACAAAGATTCTACTGGAATGTATACCAAGGATAGCTAAGAAAGACTGGACAGACGTTTTGAAAAAGAAACAGGTTGATTTGAACAACTCCATAATGTTACCAAAGAAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SN31	S-methyl-5'-thioadenosine phosphorylase OS=Nematostella vectensis OX=45351 GN=v1g214799 PE=3 SV=1
Q7ZV22	S-methyl-5'-thioadenosine phosphorylase OS=Danio rerio OX=7955 GN=mtap PE=2 SV=2
F6V515	S-methyl-5'-thioadenosine phosphorylase OS=Xenopus tropicalis OX=8364 GN=mtap PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005332 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048 all species →	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018099 all species →	Conserved_site	Purine phosphorylase, family 2, conserved site	Interproscan
IPR010044 all species →	Family	Methylthioadenosine phosphorylase (MTAP)	Interproscan
IPR000845 all species →	Domain	Nucleoside phosphorylase domain	Interproscan
IPR035994 all species →	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42679 all species →	S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016763 all species →	Molecular Function	pentosyltransferase activity	Interproscan
GO:0017061 all species →	Molecular Function	S-methyl-5-thioadenosine phosphorylase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009116 all species →	Biological Process	nucleoside metabolic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019509 all species →	Biological Process	L-methionine salvage from methylthioadenosine	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00772	mtaP, MTAP; 5'-methylthioadenosine phosphorylase	EC:2.4.2.28	Cysteine and methionine metabolism	ko00270	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.