Gene detail

Detailed information of HK74SY85_g26808 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg487:39489...40952
NR annotation: XP_027048186.1, uncharacterized protein LOC113675779 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g26808

atggtagaagaatggcaacacgtcccagggacactcaaccctgcagacgacgcatcaagaggaattcgccctagtgacctgacacctactcatcgttggatccatggtcctgtcttcctgtggcaacccgaatcctattggccaaactccaatgaggtagagttcgaagtcccgcccgagttgctagaagttaaggatgaaagaaagaagcccatcgactcaaacgcattgctagctcacacagcatgccagacgggatcaacaaccagtagccagccaagtaatatacaacagatgataaacgattgctctgattggaccgtgcttcgacggcgaattgcctggcttcaacgctttgttaagtatgtagccgaccgcaaaacagttcctactggtggacttacagttgatgagtacgagaacgcagccttagcaattatcaaggtaatacagaaatcagcctaccaacgtgagaagatcgatcttgagacgaaagggacaatcaaagtcacaagtaagatcgccagcctgacacctgtacttgacacaaacggtctgatccgatgcagcggacgtgcaaggaccgctcccataacatgtgatgccaaacaacagatgatcgtaccaagaggacaccacgtggcacgcctaatagtcaaacatacacacgctttgattggacaccttggtcgagaacacgtgctagcgaagattagagaacgatactggattcctcaggcaagagttctgatccgctcaatcctcagccattgtgtcacatgtaagaagtttaatgccacgcccattgtccaacagatggctcaccttccaaaggatagaactaccgcctttgagccccccttttgttatacaggaatggacttcttcggaccactgcacgttaagcatggacgagggactgccaagcgatggtgctgtttgtttacctgtttgaatacgagaagtgttcacttggagctcgttaactctctcgacactgatgacttcatactgtgtctcatacgttttgtgaaccgcagaggggaagtgactcacctgagatgtgacagaggtacgaactttgttggggcagagcgtgagctccgagaaggcctacagcaatggaaccaagaccaaatcgaaagagagctcgcccaaagaggttgcaaatggatctttcagcctccaactgcatcgagtatgtcgggcgtttgggagagactggttcgaagcgccaagaacgtcatcaaggcgacaattggtcaacaaactctaaccgacactgccctccaaacactgcttaccgaagtcgaacgcatcttaaatggtcgcgcactaacagccaactccgatagcccagacgacctgcaggcactcacgccagcacattttctaatgcagaggaaaacgatcagtctcccaccaggtctgtttgatgacaaagacctctaccaccgaaaaagtatggtagaagaatggcaacacgtcccagggacactcaaccctgcagacgacgcatcaagaggaattcgccctagtgacctgacacctactcatcgttggatccatggtcctgtcttcctgtggcaacccgaatcctattggccaaactccaatgaggtagagttcgaagtcccgcccgagttgctagaagttaaggatgaaagaaagaagcccatcgactcaaacgcattgctagctcacacagcatgccagacgggatcaacaaccagtagccagccaagtaatatacaacagatgataaacgattgctctgattggaccgtgcttcgacggcgaattgcctggcttcaacgctttgttaagtatgtagccgaccgcaaaacagttcctactggtggacttacagttgatgagtacgagaacgcagccttagcaattatcaaggtaatacagaaatcagcctaccaacgtgagaagatcgatcttgagacgaaagggacaatcaaagtcacaagtaagatcgccagcctgacacctgtacttgacacaaacggtctgatccgatgcagcggacgtgcaaggaccgctcccataacatgtgatgccaaacaacagatgatcgtaccaagaggacaccacgtggcacgcctaatagtcaaacatacacacgctttgattggacaccttggtcgagaacacgtgctagcgaagattagagaacgatactggattcctcaggcaagagttctgatccgctcaatcctcagccattgtgtcacatgtaagaagtttaatgccacgcccattgtccaacagatggctcaccttccaaaggatagaactaccgcctttgagccccccttttgttatacaggaatggacttcttcggaccactgcacgttaagcatggacgagggactgccaagcgatggtgctgtttgtttacctgtttgaatacgagaagtgttcacttggagctcgttaactctctcgacactgatgacttcatactgtgtctcatacgttttgtgaaccgcagaggggaagtgactcacctgagatgtgacagaggtacgaactttgttggggcagagcgtgagctccgagaaggcctacagcaatggaaccaagaccaaatcgaaagagagctcgcccaaagaggttgcaaatggatctttcagcctccaactgcatcgagtatgtcgggcgtttgggagagactggttcgaagcgccaagaacgtcatcaaggcgacaattggtcaacaaactctaaccgacactgccctccaaacactgcttaccgaagtcgaacgcatcttaaatggtcgcgcactaacagccaactccgatagcccagacgacctgcaggcactcacgccagcacattttctaatgcagaggaaaacgatcagtctcccaccaggtctgtttgatgacaaagacctctaccaccgaaaaagt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan