Gene detail

Detailed information of HK74SY85_g31258 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg1397:13130...14669
NR annotation: XP_020907897.2, uromodulin [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g31258

GGTGGTGACACTGGATGGATTGGATTACAGGATATTCACAGTGAAGGCAACTTTACATGGATTGATGGAACTCATGTAAACTTTACTTACTGGGCGAAAAATCAGCCTAATGGTTACCCTGGTGACCAGGATTGCGTGCACTCTCTAGGATTACGTCATGATTATCACTGGAATGACGTCACGTGTGGATCCTGTCACACATACACATGTAAACGAGGTACACATCGATAATGTTGTAGTGGTTAAACTTATCTTTCTTAGTTTGATATACCCTTGTCCGCAGACGGCAACGTTTTGATATTCGGAGGAATTGGCTACAGGTGGAAGTGGAAGTTCAAAAAGACCAACAGGGGAGGAGAGGGCCAGTATGAATTGTTGTTCTACCATATCCAAAGTCGTCTACTTTTCGTCCTGTTAACATATACCAATACATGAGTAACCTGTGAAGGTGCATGGTTTTCGGCATAGTATGGTTTTTATTTCATGTCTTTTATTCATTCTGTTGGCTATTAAAACATTAATTATTTTGGTCTAATTATCAttgttgtcgttttatctagatatcgacgaatgttcgtttggtttccatacttgtgatgataatgcacgctgtaccaacaccgtgggctcttatacttgtcagtgtaatgctggttaccatggtgttggacaaacatgcccgggtacctactcagtgatgccttttacttcgagttacttgagataaatctaaacctttgattgttgatcggttttagattttactaattttgcaattgttgtaatttttatagatatcaatgaatgttcgtctggtgcccacacctgtcatgctgatgcaacctgtaccaacaccgatggttcctatacttgtcagtgtaagcctggttatcagggtgatggacgtacatgcggcatactaggtaggtactcaacaaagtatttttGTACTTCTTACTCGTCAGTGGTCATTCTCTTGCTTGCACTCATAACTTATGCTCAAAACTGATTGTCCAAGAGCAGAAAGTTTGTTCCACATGTTATTTAATTAATTTTAAAAATATTAGAGACTGTACTACAAGAACTGGAAACTTCAGCTTTTTCCGGATATTGTTTCATTTTTAGTGTCACTAAAAAATATATTTTATCGACATATTTATAATTTTGTCCATTTTCAGATCCTGTCTGCTCTTCGTACACCAGCATTACAGATGCAACTCGAAATATCAATTATGGAAGACCAATTAATAACTGTGACAGTAGCATCTCCGTTCAGtggtaccgtctcacaggaggtgctggtgttcgtatgccaacatcgtgtgtgccaacgcatcggtgtgacacagacgctacaggttggctcagcgatccccaccctaccgttggacagggaatagtatcaagaaaagtttgcttccattggagtagcaattgctgttattggtctaatatgataagagtgcgtaactgcaggtctttttatgtgtatgaatttaagccacctccttcctgccaacttcgctattgtggaaCAAATGGTGGTGACACTGGATGGATTGGATTACAGGATATTCACAGTGAAGGCAACTTTACATGGATTGATGGAACTCATGTAAACTTTACTTACTGGGCGAAAAATCAGCCTAATGGTTACCCTGGTGACCAGGATTGCGTGCACTCTCTAGGATTACGTCATGATTATCACTGGAATGACGTCACGTGTGGATCCTGTCACACATACACATGTAAACGAGatatcgacgaatgttcgtttggtttccatacttgtgatgataatgcacgctgtaccaacaccgtgggctcttatacttgtcagtgtaatgctggttaccatggtgttggacaaacatgcccggatatcaatgaatgttcgtctggtgcccacacctgtcatgctgatgcaacctgtaccaacaccgatggttcctatacttgtcagtgtaagcctggttatcagggtgatggacgtacatgcggcatactagATCCTGTCTGCTCTTCGTACACCAGCATTACAGATGCAACTCGAAATATCAATTATGGAAGACCAATTAATAACTGTGACAGTAGCATCTCCGTTCAGtggtaccgtctcacaggaggtgctggtgttcgtatgccaacatcgtgtgtgccaacgcatcggtgtgacacagacgctacaggttggctcagcgatccccaccctaccgttggacagggaatagtatcaagaaaagtttgcttccattggagtagcaattgctgttattggtctaatatgataagagtgcgtaactgcaggtctttttatgtgtatgaatttaagccacctccttcctgccaacttcgctattgtggaaCAAAT

Protein

Uniprot

Uniprot term	Description
P25291	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24039	FIBRILLIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan