Gene detail

Detailed information of HK74SY85_g3404 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg15:425112...427615
NR annotation: XP_020911755.1, 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like [Exaiptasia diaphana]
Species abbreviation PXISH · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

HK74SY85_g3404

atggcgggatctggatttcgacacaaaggacggcagattggcgggattggacatattctgagggcgggaaagtgggattcaacagcccctattggggacccTCtgtatacgaagctgtaagatgaccttttttgaaatagctgtaCGTAACACTACAAATATCATTGCTGACCAACCCTAATGACGCCTCAGGAAAATTACCATTCAGGCTATTAACAACATTTTACTTAAGACATACAAACAAGAATAAATGACAAGAATAATAACATATTTATTCAGGATGGCAACTACAGTTATGGAAAACTGCTATCAATATGGGTCCTACCAACAATCTACCAACAAACTACATGTAGATTAAACCACAACGTGATATTTAAATTAACTCGGAGACAAACTACAAAAGACCTATACTTGCAGAGATGTGTTGTGGTTAACTTTGTAATGTTATTACTTGGAaatcttactaaggtattctgtcttaggtaaccagaacaaattcaatcttactaaggtattctgtctcaggtaaccagaacaaactcaaGACCTATAGCAGCAGGACAAATAAGCCATTTCCAAGCACTGGTTTTTCTTGGAGCTCAGTTGAGCTGCGGTCTTGCAGTTCTTCTTTCTTTAAATAATTACAGGTACTAGATCTATACATCTGCTAGAATGAAGTGTGTGTTAAGTCAATGCAACATCTATCAGACTAGACTGTGTAGCACTCTGGACTGGAAGGAGAAGATAATTAATGGGGATATGTTCTCCTTAATGCCAGGCAATCACGTTTCAAGCAGTTATTAAAACACATTATCATTGTTTATCTTAAGCATTGTCCTTGGAGCATCTTCTCTGGGTTTTGTTGCAACATATCCTCTGATGAAGAGAATAACACACTGGCCGCAAGTTATGTTAGGTAAGTTTGATGTATATCATCAAAAGTGACTTTAATGAATTGAGACTAAGTTGTTTTGGCTATTTAGAGCCTTTTGGTTTTTAAAACATCACTAGGCAATAACTGTGCAGTTAGCGACAAATGTCTCTGACCCAGCAAGTTGTCTGCATAAACAGCTGACGTTTTCTCTTTTTGTATTGTGCTACAGGATTAACATTCAACTGGGGTGCATTGGTCGGATGGTCTGCAGTGAAAGGTAGTTGTGATTGGTCAGTTTGCCTGCCTCTTTACATGAGTGCATTTTTCTGGACAATGGTTTATGATACCATCTATGCTCATCAGGTTAGCAATAAATGACTATTATCATTATtactccctcagtgctccatcagtgctccatctcatgtgttttcaagcaacactgagctacaaggattagagggaaatcaaaatagggatgcaagaactaaatacaagtcaaaccatgcatctctcacttAgaccaaataccaagatatgtaagggaaataagaactgttatatactaaataaatacaagtcaaaccatgcatctctcacttagatggcccacatgctgaccaaataccaagatatgtaagggaaataagaactgtgttatatactaaataaatacaagtcaaaccatgcatctctcacttagatggcccgcatgctgaccaaataccaagatatgtaagggaaataagaactgtgttatatactaaataaatacaagtcaaaccatgcatctctcacttagatggcccgcatgctgaccaaataccaagatatgtaagggaaatgagaactgtgttatatactaaataaatacaagtcaaaccatgcatctctcacttagatggcccgcatgctgaccaaataccaagatatgtaagggaaatgagaactgtgttatatactaaataaatacaagtcaaaccatgcatctctcacttagatggcccgcatgctgaccaaataccaagatatgtaagggaaatgagaactgtgttatatactaaatGATTTCAGGACAAAGAAGATGACGTTAAAATAGGAGTAAAGTCAACAGCATTACTCTTTGGCGACTCAACAAAGTATTGGCTGTCTGCATTTAGTGTTGCTATGGTAACTAACCTAGCTTTAGCAGGACTGGCTGCTGAACAATCCTGGCCATACTATGCAGGAGTAGGACTTACAGCTGCACATTTGACATGGCAGGTATGATGTGCTTATTGCCTGTGTTATCCTTTCATTTATTTGCACACTTTCAGAAGACAGATTTAGCAAACAGATGACAGGGCACATACACATGAAAACATTTCAAAGACCATTATGTTGTTAACAAGAAGACGGTCCTGAAAACATGTTATATACTGTATAATTTATCCATCACAATGTTGTCATGGTGATACAGTGAATGAGTATAATTTGTGTTTAGATTGCAGCAGTAGATCTGAATAACCCAAGCGACTGCCTTACAAAGTTCAAATCCAACAAATGGCTGGGATTGATCATATTAGCAGCAGTTATGAGTGGGATACTCTACAAAGACAAACAAACTAGACAGAAAAACATGGATTCTTAGatggcgggatctggatttcgacacaaaggacggcagattggcgggattggacatattctgagggcgggaaagtgggattcaacagcccctattggggacccTCtgtatacgaagctCATTGTCCTTGGAGCATCTTCTCTGGGTTTTGTTGCAACATATCCTCTGATGAAGAGAATAACACACTGGCCGCAAGTTATGTTAGGATTAACATTCAACTGGGGTGCATTGGTCGGATGGTCTGCAGTGAAAGGTAGTTGTGATTGGTCAGTTTGCCTGCCTCTTTACATGAGTGCATTTTTCTGGACAATGGTTTATGATACCATCTATGCTCATCAGGACAAAGAAGATGACGTTAAAATAGGAGTAAAGTCAACAGCATTACTCTTTGGCGACTCAACAAAGTATTGGCTGTCTGCATTTAGTGTTGCTATGGTAACTAACCTAGCTTTAGCAGGACTGGCTGCTGAACAATCCTGGCCATACTATGCAGGAGTAGGACTTACAGCTGCACATTTGACATGGCAGATTGCAGCAGTAGATCTGAATAACCCAAGCGACTGCCTTACAAAGTTCAAATCCAACAAATGGCTGGGATTGATCATATTAGCAGCAGTTATGAGTGGGATACTCTACAAAGACAAACAAACTAGACAGAAAAACATGGATTCTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q16QL3	4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Aedes aegypti OX=7159 GN=coq2 PE=3 SV=1
Q96H96	4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=COQ2 PE=1 SV=2
Q499N4	4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005168 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01040 all species →	UbiA	UbiA prenyltransferase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039653 all species →	Family	Prenyltransferase	Interproscan
IPR044878 all species →	Homologous_superfamily	UbiA prenyltransferase superfamily	Interproscan
IPR000537 all species →	Family	UbiA prenyltransferase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11048 all species →	PRENYLTRANSFERASES	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002083 all species →	Molecular Function	obsolete 4-hydroxybenzoate decaprenyltransferase activity	Interproscan
GO:0006744 all species →	Biological Process	ubiquinone biosynthetic process	Interproscan
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0031305 all species →	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06125	COQ2; 4-hydroxybenzoate polyprenyltransferase	EC:2.5.1.39	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.