Detailed information of HK74SY85_g3497 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg15:1349898...1362706
NR annotation: XP_020910263.1, PAN2-PAN3 deadenylation complex subunit Pan3 [Exaiptasia diaphana]
Species abbreviation PXISH · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L1C7PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1
Q58A45PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
Q640Q5PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18101
all species →
Pan3_PKPan3 Pseudokinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011009
all species →
Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR030844
all species →
FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan
IPR041332
all species →
DomainPan3 pseudokinase domainInterproscan
IPR000719
all species →
DomainProtein kinase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12272
all species →
DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000289
all species →
Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932
all species →
Cellular ComponentP-bodyInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0006397
all species →
Biological ProcessmRNA processingInterproscan
GO:0008143
all species →
Molecular Functionpoly(A) bindingInterproscan
GO:0031251
all species →
Cellular ComponentPAN complexInterproscan
GO:0004672
all species →
Molecular Functionprotein kinase activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0006468
all species →
Biological Processprotein phosphorylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12572PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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