Gene detail

Detailed information of HK74SY85_g6414 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg35:1209919...1210911
NR annotation: XP_031559840.1, uncharacterized protein LOC116296017 [Actinia tenebrosa]
Species abbreviation PXISH · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

HK74SY85_g6414

ATGGATGAAAACAACACCCTTCCCAACGAAATTGAAGCAGGCCTAAAATGCATTCCTCTATCAGCCATTCAGTCTATTACAATTCTCATGGTTGTTGACAGCATTCTACTCAATAGTTTTATGCTTTGTTGCTGCAGGAAGGCGTTCCGCCATAGTACATATGCCGTGTGTCTCATGACCATGTCCACGAACAACTTGGTGGCATCTTGTATAAGTCTGCCCTTGTACTATATGGAGGTTTATTCGAACGATGTAGTAAAATACATCCCTTTACAATTAGCAAATGCACTGTGTGTAACTCGTTATGTCTCCATCATTACTTGTCTGGCAGTTGGTCTTTGTACTTTGAATATCATTTGCTGGGATCGTTACGAAGCATTGACAAGGCTTGGGAAAGCCAGGCGAATCACACCCATTATCGCCGGCCGAATTATTTTAGCAGTGATTGTAATCGTTGTGAGCTTTTTGCTCATTACAAACTTCTCAGTCTTGAAATACATGGCGGATGGAAACTTGACCTGCAAATCAAAGGAAATCGACAAGTATGCTCGGATGTCCACTATTGCAGTGATGGTACTAGTTTCAGTTATTATCATAATATCAAAGGCCATTGCAATATTCACCTTCTCTTCTATTGCAAAACAAATTCGCCGACACATCGCAGAAGTTCGTCAAACCTTGGGTAATCAGAATGCTGTCAAAGAACTAAATCTGGTGAAAGTGTCAGTCGTGATATTTGTGGCATACACAGTATCATGGCTACCTTTTGGAGTTTCCAGAGGTCTTATGAACGCAATCCCCAACCGTGCTATTTCATGTTTTTATTCAATAAGTTCTCTTTGGGCCTACTCTTTATTTTCTTTCCTTCCTTTGCTCTGTATTTGCACAGATAAAAAGATGAAGTCTAGTTTACGAAAAATGTTTCTTTGCAACCGCGTGGCACCAGCTGCGCCACAAGTACCAAACAACGTATCTACTCGAATTACTTCGAATATGGATGAAAACAACACCCTTCCCAACGAAATTGAAGCAGGCCTAAAATGCATTCCTCTATCAGCCATTCAGTCTATTACAATTCTCATGGTTGTTGACAGCATTCTACTCAATAGTTTTATGCTTTGTTGCTGCAGGAAGGCGTTCCGCCATAGTACATATGCCGTGTGTCTCATGACCATGTCCACGAACAACTTGGTGGCATCTTGTATAAGTCTGCCCTTGTACTATATGGAGGTTTATTCGAACGATGTAGTAAAATACATCCCTTTACAATTAGCAAATGCACTGTGTGTAACTCGTTATGTCTCCATCATTACTTGTCTGGCAGTTGGTCTTTGTACTTTGAATATCATTTGCTGGGATCGTTACGAAGCATTGACAAGGCTTGGGAAAGCCAGGCGAATCACACCCATTATCGCCGGCCGAATTATTTTAGCAGTGATTGTAATCGTTGTGAGCTTTTTGCTCATTACAAACTTCTCAGTCTTGAAATACATGGCGGATGGAAACTTGACCTGCAAATCAAAGGAAATCGACAAGTATGCTCGGATGTCCACTATTGCAGTGATGGTACTAGTTTCAGTTATTATCATAATATCAAAGGCCATTGCAATATTCACCTTCTCTTCTATTGCAAAACAAATTCGCCGACACATCGCAGAAGTTCGTCAAACCTTGGGTAATCAGAATGCTGTCAAAGAACTAAATCTGGTGAAAGTGTCAGTCGTGATATTTGTGGCATACACAGTATCATGGCTACCTTTTGGAGTTTCCAGAGGTCTTATGAACGCAATCCCCAACCGTGCTATTTCATGTTTTTATTCAATAAGTTCTCTTTGGGCCTACTCTTTATTTTCTTTCCTTCCTTTGCTCTGTATTTGCACAGATAAAAAGATGAAGTCTAGTTTACGAAAAATGTTTCTTTGCAACCGCGTGGCACCAGCTGCGCCACAAGTACCAAACAACGTATCTACTCGAATTACTTCGAAT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005422 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050125 all species →	Family	G-protein coupled receptor opsins	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24240 all species →	OPSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007602 all species →	Biological Process	phototransduction	Interproscan
GO:0008020 all species →	Molecular Function	G protein-coupled photoreceptor activity	Interproscan
GO:0071482 all species →	Biological Process	cellular response to light stimulus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for HK74SY85_g6414.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.