Gene detail

Detailed information of HK74SY85_g719 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg4:441902...445418
NR annotation: XP_020917237.1, myosin-2 essential light chain [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g719

CAGTCTTCCCTTACTGACGATCAGATTGGAGGTAAATGCAGCATCGTAACATGAAATTCAAACATTGTTCTGCGCACAGAATTCCAAGGGCTACAGGGCGTTGTTGGTTTCGTGTGGACTTTCCAAGATGGAGTAAAGATTAACAGCTGTTTTATTGTGCTTGTTTTTGCAGAGTACAGGGAAGCTTTTAGCTTGTTCGACCGAAAAGGCGACAACAAAATCGAGCACGACCAAATAGGTGATGTTTTGCGGTCCCTCGGCCTGAATCCCACTGCAGGCGAAGTCAAGAAGATCGAGAAAGATGTTGGTAGGTATTAATTTTGAACATCTGTCCTTCTTACATTGCACTTTATACGCTTGATTTCTGTATTTGTGGTAATTAGATTATCGATACTACAGCAGTATGCTAAAATATCTGCCATTTATGCAATCGATTAATCGGCTTTGAAGTACAGATGTGTTAGCTAGCAATGTTTTGAAAACACGATAGACCTCTTGCAGAGACTTTATCTTCTTCCTGGCATGGTTTATCGCTCGTATCTCTAAACCCGCCTATTTCACAGTTCGCCTTTGTATAGAAGCTTGTATTCTAAGTGTTTTTATTGTTGTCTTTGTGAAACAAATCCCACCAGGACTTCCATGATCCAACGTTCTGGTTCTGATCACGGTGTACACATATCGTGACATGCGATCGAACGTTCGATCCAGCGCTCGAAACGCCCCATACCAAGCCTTAAAGACTGGCCCTTATATCACAAACAAAGCCCAACGACATACATTGCAATTAGTCAGTCAAAGTACATCGTTTTGTAAGCACAATAAACGATCCAGACTTGCTAAAATATTTTTATTGTTGAACATGTCATGAACAGCTTCGCAATGGTCTAATTTTGAATAGCGACTTTTCTTGTAGGTTTCGTTTTGCGATGAAATTAACACCGAAATCGATTACAGTTAAATAATTATAGTATTTGTATGTTTCAAGATCGTTTTACAAGCGTTAGTTGTTTATATTTATTTCGTAAACCTTCGGTTCGAAATCTTGAGTGTTTACACTTTTCAAAGTGTGTTTATAGCATACAAATGTTTAAAATTTAGTTTATGATTACAGTAAATGATCACTGATCTTGTCCAATTTTATTACCACTCAGACAATTGGTTGACCTGGATATATTAATAATTTATACTAGCGTTTTTAAAAACAGATATTTAGAAAAAGGTTTAATCTCTTTGATCATGCAAATTAATTATTCATAAAaatattctaattttgtatttctaatttcttatgtgataatttGATTAACACCATCACATTACTGACCAATTGTAGTAACAGCTTGACTAGTCAAATGTTCAATAAGCCTTTGATACAAATTGTTGTACAAGCTAGGTCAGATGTGATCAGTCACAATGGACACCTGTTCACACCCCAAACCTGTCATGTCATGCTGTTTTAAGTATCATTGCATATTTTTTATAAGTGTGTGCTGTCATTCATGTTAGTATGTCACTGTTATTAATTTGACCTTTGTTTTTTGAAATATATGCCGCTGGAATGAATAAATACAAAAGGGTTTCTTTATAGTAATAGAGGAGGAGGATGACTGCTTCTCAAATGCAAAAATGAGCTATTGGGATATCAGAAATATAAAAATGTTACAAAATGTTAGGGCTGCAGGGCAAATATACTAATTAGCTATACTTTACAatgatatactttgatgcttttatgtatatacagtatgatatactttgttgcttttatgtatatacagtaCTTAGCATTGCTTTGTCTGCTAGGTTCAAAACGTGTCAGCTTTGAAGAATTTCTTCCAATCTACCACTCTGTATATCAAAAGAAACCTAATCCTTCATTAGAGGAATTCATTGAAGGCTTTAGAGTATTTGACCGTGATGGCACTGGTACTGTACAGGCTGCAGAGCTCAGAAACCTACTAACAACACTTGGTAAGTCAACCAACTTGtaggggatgtacaccagggatggtggggctgcagtcaccccccccccccccacataggagatgtacaccagggatggtggggctgcagtcattcccccacacccccccacacacacactttttcttaaggaatattaattttaaaggagcaatttgaaaaaaatagttgtaAGGACTGTTATATGTATTcttgggttgcaaccacaatcatgactgaaaatccctcgagaaataaatgacaatgaaacagctgccatgttggatgaactaacaagagaagctaatgaggaatgctttgttattgggaaccaatatggcagctgtgacgtaatgtacaacccaaGAATACAGGATGTAAGTTCTTTAGTTTCTGTTGTAGGGCTTGCTCTTAAACCAGACACTGAACAACAAGTTCATTTTTTATGTTCATTTTTAGGTGAGAAACTCACAGATGATGAAGTGAATGCTCTGTTTTCTACTGTGGATGACCAAAGTGGCTTTATTGCTTATGAAGGTAACAATCTGACTATTATAAAAATATATTTATTGCATAGCACATCTGTTTTTTTTTTACCAAATACAGTTGCTGTAAATTCTCTCTCCCTAAGTGgacacctttctcaaggcaacatgacacctttctcaaggcaacatATCTATTCTTAGGCCAGGTTCAAACATACTTTCCACATGCCCTTTGTACTTCACATTTTAGTTGACCCAAATTAATGAACATGACCTGCTGAAGCAGACGCTGTTTTATTTCAAGCATTCCAAGTTAATGTGCCACTTGTTCATGGCTCTACATTACAATACTTTTCCAAGTACTAAATaatttacagagccatatggtgcagctggctcagggggagtggctaaggcatgcagaaccttatgccgctccaaatcaaatcagcccttccaaattgattcagaccccaaactttccatgtacgtaattgcaacaatttggtatggagcatggaaagtatggcatttgaactaagccttgcattggtgtagtaactcacaaacatcatatttgaactaagccttgcattggtgtagtaactcacaaacatcacgtttgaactaagccttgcattggtgtagtaactcacaaacatcatatttgaCTTGAAGATTCTACAACAAACATGAATATTTATGTATGAACAACTTTTAAAATAAGGAACTTTGAAAGCATATACAACTCCCAGCAGAGAAACaattcactgattgacctctagagctcatgtggtgtacatgatgttactgttatcaaaaagtttggacattgtcattgaattgccgtacaaatgcactaactAcgataaacagtacaaaagtttatagtgcgtttgtatggcaattcaatgacaatgtccaaactttttggtgacagtaacatcaagtacaccacgtgagctctaggggttaatcggtgatttgTACTCATATTTCTTTAAACCTACTGATAAACTCTAAATATTATCTTTCTAGACTTTGTGAAAGTTATCATATCAGGACAGTCTTCCCTTACTGACGATCAGATTGGAGAGTACAGGGAAGCTTTTAGCTTGTTCGACCGAAAAGGCGACAACAAAATCGAGCACGACCAAATAGGTGATGTTTTGCGGTCCCTCGGCCTGAATCCCACTGCAGGCGAAGTCAAGAAGATCGAGAAAGATGTTGGTTCAAAACGTGTCAGCTTTGAAGAATTTCTTCCAATCTACCACTCTGTATATCAAAAGAAACCTAATCCTTCATTAGAGGAATTCATTGAAGGCTTTAGAGTATTTGACCGTGATGGCACTGGTACTGTACAGGCTGCAGAGCTCAGAAACCTACTAACAACACTTGGTGAGAAACTCACAGATGATGAAGTGAATGCTCTGTTTTCTACTGTGGATGACCAAAGTGGCTTTATTGCTTATGAAGACTTTGTGAAAGTTATCATATCAGGA

Protein

Uniprot

Uniprot term	Description
P54357	Myosin-2 essential light chain OS=Drosophila melanogaster OX=7227 GN=Mlc-c PE=1 SV=1
P02605	Myosin light chain 3, skeletal muscle isoform OS=Gallus gallus OX=9031 PE=1 SV=3
P82159	Myosin light chain 1, skeletal muscle isoform OS=Chelon ramada OX=30804 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13405	EF-hand_6	EF-hand domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR050230	Family	Calcium-Regulated Muscle Contraction and Cellular Process	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23048	MYOSIN LIGHT CHAIN 1, 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016460	Cellular Component	myosin II complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12751	MYL6; myosin light chain 6	-	Exosome	ko04147	deepkoala