Detailed information of HK74SY85_g8938 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg58:3616432...3624078
NR annotation: XP_020907998.1, DNA-directed RNA polymerase II subunit RPB1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G3MZY8DNA-directed RNA polymerase II subunit RPB1 OS=Bos taurus OX=9913 GN=POLR2A PE=1 SV=2
P11414DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2
P24928DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05001RNA_pol_Rpb1_RRNA polymerase Rpb1 C-terminal repeat RepeatInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF04992RNA_pol_Rpb1_6RNA polymerase Rpb1, domain 6DomainInterproscan
PF04990RNA_pol_Rpb1_7RNA polymerase Rpb1, domain 7DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038593Homologous_superfamilyRNA polymerase Rpb1, domain 7 superfamilyInterproscan
IPR000684RepeatRNA polymerase II, heptapeptide repeat, eukaryoticInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR007075DomainRNA polymerase Rpb1, domain 6Interproscan
IPR007073DomainRNA polymerase Rpb1, domain 7Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03006RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1EC:2.7.7.6
DNA repair and recombination proteinsko03400deepkoala

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