Gene detail

Detailed information of HOLI00001.G49069 in Hydra oligactis

Genomic Location: HOLI00001:41066...43626
NR annotation: WP_110969470.1, dihydrolipoyl dehydrogenase [Pseudomonas huaxiensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00001.g49069.t1

ATGGTTCGTCAAGGTCGGCGACACCGTCAGCGAAGACCAGGTCGTCGCCGATGTCATGACCGACAAGGCCACGGTAGAAATCCCTCGCCGGTCAGCGGCAAGGTGCTCGCCCTCGGCGGCCAGCCGGGCGAAGTCATGGCGGTGGGCAGCGAGCTGATCCGCATCGAAGTCGAAGGTGCCGGCAATCATCAGGAAGGCGCCAGCAAACCGGCAGCGGTTGCCAGCGCCCCGGTCGCCACAGTGGCCGCTGCAGTAGCGGCCCCAGTGGTCGAAGCCAAACCCGCAGCCGCCGAAGCCCCGGCACACGCCGATACCCCGCGCAGCGCACCAATCGTTCCACGGGATGCCAACGAACGCCCACTGGCCTCGCCCGCCGTGCGCAAGCGCGCCTGGGACGCCGGTATCGAACTGCGTTACGTGCATGGCAGCGGCCCGGCCGGGCGCATCCTGCATGAAGACCTCGATGCCTTCCTCACCCAGCCGACCCGCGGCGACGCGGCGCCGTCCGGTTACGCCAAGCGCAGCGACAGCGAACAGATCCCGGTCATCGGCCTGCGCCGCAAGATCGCCCAGCGCATGCAGGACGCCAAACGCCGGGTGGCGCATTTCAGTTATGTCGAAGAAATCGACGTCACCGCGCTGGAAGAACTGCGCGTGCACCTGAACAAGAAATGGGGCGACAGCCGCGGCAAGCTGACCCTGCTGCCGTTTCTGGTACGGGCCATGGTCTTGGCCCTGCGCGAGTTCCCGCAGATCAACGCGACCTACGACGATGAAGGCCAGGTCATCACCCGCCATGGCGCGGTGCACGTGGGCATCGCCACCCAGGGCGACAACGGCCTGATGGTGCCGGTGCTGCGCCACGCCGAAGCCGGCAGCCTGTGGGCCAACGCCGGCGAGATCGTCCGCCTGGCCAATGCCGCACGCGGCAACAAGGCCACTCGTGAAGAACTCACCGGCTCGACGATCACCCTGACCAGCCTCGGCGCGCTCGGCGGCATCGTCAGCACGCCGGTGGTCAACACCCCGGAAGTCGCCATTGTCGGGCTCGTTCGATCACCGCGTGGTCGACGGCATGGATGCAGCGCTCTTCATCCAGGCCATCCGCGGCCTGCTCGAACAACCCGCCAGCCTGTTTGTGGAGTGACCATGCAGACCCTCAATACCACGCTGCTGATCATCGGCGGCGGCCCTGGCGGCTACATCGCGGCGATTCGTGCCGGGCAGTTGGGCATCCCCACCGTGCTGGTGGAAGGCCAGGCGCTGGGCGGTACCTGCCTGAACATCGGCTGCATTCCGTCCAAGGCACTGATCCATGTGGCCGAGCAGTTCCATCAGACCACGCAACACAGCGAGCACTCCAATCTGGGCATCAAGGTCCAGCCGCCAACCCTGGACATCGGCCAGAGCGTGGCGTGGAAAGACGGCATCGTCGACCGCCTGACCAGCGGCGTCGCGGCGCTGCTGAAAAAGAACGACGTCAAGGTGATCCATGGCTGGGCGAAGATCATCGACGGCAAGCAGGTCGAGATCGAAGGCCAGGACCTGCGTATCCAGTGCGAGCACCTGCTGCTGGCGACTGGCTCCAGCAGCGTCGAACTGCCGATGCTGCCGCTCGGCGGGCCGGTCATTTCGTCGACCGAGGCGCTGTCGCCGACCAGCCTGCCGAAACGCCTGACCGTGGTGGGTGGCGGCTATATCGGCCTGGAACTGGGCATCGTCTACCGCAAGCTCGGGGTTGAGGTCAGCGTGGTCGAAGCCCGCGAACGCATCCTGCCGACCTATGACGCCGAGTTGACCCAACCGGTAGCCGAATCGCTGAAGAAGCTCGGCGTGAAGCTGTACCTGGGACACAGCGTCGAAGGCTTCGATGCCGCCGAGAAGCGCCTGCGCGTGCGCACCCCGGAAGGCGGGGAACTGGCGCTCGACACCGACCAGGTGCTGGTCGCGGTGGGTCGCCGCCCCCGCAGCAAGGGCTTCAACCTTGAAGCACTGGCGCTGAACATGAACGGCGCGGTCATTGCCATCGACGAGCGCTGCCAGACCAGCATGCGCAATGTCTGGGCCATTGGCGACCTGACCGGCGAGCCGATGCTCGCGCACCGGGCGATGGCCCAGGGCGAGATGGTTGCGGAGCTGATCGCAGGCAAGCAGCGCGCCTTCGCCCCGGCGGGCATCGCTGCAGGTGTGTTTCACCGATCCGGAGCTGGTGGTGGCCGGCAAGACCCCGGAAGCGGCAAAGGACGCCGGACTGGACTGCGTGGTGGCGCAGTTCCCGTTCGCGGCCAATGGCCGGGCGATGACCCTGGAATCGAAAAGCGGCTTCGTGCGCGTGGTGGCGCGCCGCGACAATCACCTGATCGTCGGTTGGCAGGCGGTGGGAGTTGGTGTGTCGGAGCTGTCCACGGCATTCGCCCAGTCACTGGAAATGGGCGCACGACTGGAAGATGTGGCGGGCACTATCCATGCTCACCCGACCCTGGGTGA

Transcript

HOLI00001.g49069.t1

Protein

Uniprot

Uniprot term	Description
P09063	Dihydrolipoyl dehydrogenase OS=Pseudomonas putida OX=303 GN=lpdV PE=1 SV=1
Q9I1L9	Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=lpdV PE=1 SV=1
P09062	Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas putida OX=303 GN=bkdB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00198	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF02817	E3_binding	e3 binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012999	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR004167	Domain	Peripheral subunit-binding domain	Interproscan
IPR001078	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR036625	Homologous_superfamily	E3-binding domain superfamily	Interproscan
IPR050151	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016668	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0004148	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00382	DLD, lpd, pdhD; dihydrolipoyl dehydrogenase	EC:1.8.1.4	Exosome	ko04147	deepkoala