Detailed information of HOLI00001.G49128 in Hydra oligactis

Genomic Location: HOLI00001:107855...108847
NR annotation: WP_175653623.1, MULTISPECIES: tRNA-dihydrouridine synthase [unclassified Pseudomonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q88LF2tRNA-dihydrouridine(16) synthase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=dusC PE=3 SV=1
Q9AMN9tRNA-dihydrouridine(16) synthase OS=Aquipseudomonas alcaligenes OX=43263 GN=dusC PE=3 SV=1
Q9HZ95tRNA-dihydrouridine(16) synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dusC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01207DusDihydrouridine synthase (Dus)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR035587DomainDUS-like, FMN-binding domainInterproscan
IPR032886FamilytRNA-dihydrouridine(16) synthaseInterproscan
IPR018517Conserved_sitetRNA-dihydrouridine synthase, conserved siteInterproscan
IPR042270Homologous_superfamilytRNA-dihydrouridine(16) synthase, C-terminalInterproscan
IPR001269FamilytRNA-dihydrouridine synthaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11082TRNA-DIHYDROURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0002943Biological ProcesstRNA dihydrouridine synthesisInterproscan
GO:0017150Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05541dusC; tRNA-dihydrouridine synthase CEC:1.-.-.-
Transfer RNA biogenesisko03016deepkoala

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