Gene detail

Detailed information of HOLI00001.G49251 in Hydra oligactis

Genomic Location: HOLI00001:276148...277314
NR annotation: WP_043863134.1, MULTISPECIES: ADP-forming succinate--CoA ligase subunit beta [Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B0KNW8	Succinate--CoA ligase [ADP-forming] subunit beta OS=Pseudomonas putida (strain GB-1) OX=76869 GN=sucC PE=3 SV=1
Q3KFU6	Succinate--CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=sucC PE=3 SV=1
Q4KFY6	Succinate--CoA ligase [ADP-forming] subunit beta OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=sucC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF08442	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR017866	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR005809	Family	Succinate--CoA ligase-like, beta subunit	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR013650	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11815	SUCCINYL-COA SYNTHETASE BETA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006104	Biological Process	succinyl-CoA metabolic process	Interproscan
GO:0042709	Cellular Component	succinate-CoA ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01903	sucC; succinyl-CoA synthetase beta subunit	EC:6.2.1.5	Carbon fixation pathways in prokaryotes	ko00720	deepkoala