Gene detail

Detailed information of HOLI00001.G49331 in Hydra oligactis

Genomic Location: HOLI00001:378700...379715
NR annotation: WP_095159234.1, MULTISPECIES: phenylalanine--tRNA ligase subunit alpha [unclassified Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B1J6U8	Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas putida (strain W619) OX=390235 GN=pheS PE=3 SV=1
A5W5D7	Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=pheS PE=3 SV=1
B0KKR4	Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas putida (strain GB-1) OX=76869 GN=pheS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01409	tRNA-synt_2d	tRNA synthetases class II core domain (F)	Domain	Interproscan
PF02912	Phe_tRNA-synt_N	Aminoacyl tRNA synthetase class II, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR022911	Family	Phenylalanine-tRNA ligase alpha chain 1, bacterial	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR002319	Domain	Phenylalanyl-tRNA synthetase	Interproscan
IPR010978	Homologous_superfamily	Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm	Interproscan
IPR004188	Domain	Phenylalanine-tRNA ligase, class II, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004826	Molecular Function	phenylalanine-tRNA ligase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006432	Biological Process	phenylalanyl-tRNA aminoacylation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01889	FARSA, pheS; phenylalanyl-tRNA synthetase alpha chain	EC:6.1.1.20	Transfer RNA biogenesis	ko03016	deepkoala