Detailed information of HOLI00001.G49510 in Hydra oligactis

Genomic Location: HOLI00001:594332...594913
NR annotation: WP_009394976.1, MULTISPECIES: heavy metal response regulator transcription factor [Pseudomonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02540Transcriptional activator protein CopR OS=Pseudomonas syringae pv. tomato OX=323 GN=copR PE=1 SV=1
Q44006Transcriptional activator protein CzcR OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=czcR PE=2 SV=1
I1WSZ4Transcriptional activator protein IrlR OS=Burkholderia pseudomallei (strain 1026b) OX=884204 GN=irlR PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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