Genomic Location: HOLI00001:721975...723881
NR annotation: WP_175649869.1, beta-ketoacyl-[acyl-carrier-protein] synthase family protein [Pseudomonas sp. Marseille-P9899]
| CDS | ||||
| HOLI00001.g49602.t1 | ||||
| Transcript |
| HOLI00001.g49602.t1 |
| Protein |
| HOLI00001.G49602 |
| Uniprot term | Description |
|---|---|
| P40804 | Polyketide biosynthesis malonyl-ACP decarboxylase PksF OS=Bacillus subtilis (strain 168) OX=224308 GN=pksF PE=1 SV=3 |
| Q5TKS0 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus OX=1280 GN=fabF PE=3 SV=1 |
| Q5HHA1 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) OX=93062 GN=fabF PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02801 | Ketoacyl-synt_C | Beta-ketoacyl synthase, C-terminal domain | Domain | Interproscan |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | Domain | Interproscan |
| PF00109 | ketoacyl-synt | Beta-ketoacyl synthase, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016039 | Homologous_superfamily | Thiolase-like | Interproscan |
| IPR000794 | Family | Beta-ketoacyl synthase | Interproscan |
| IPR020841 | Domain | Polyketide synthase, beta-ketoacyl synthase domain | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR014031 | Domain | Beta-ketoacyl synthase, C-terminal | Interproscan |
| IPR020904 | Conserved_site | Short-chain dehydrogenase/reductase, conserved site | Interproscan |
| IPR002347 | Family | Short-chain dehydrogenase/reductase SDR | Interproscan |
| IPR014030 | Domain | Beta-ketoacyl synthase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11712 | POLYKETIDE SYNTHASE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016746 | Molecular Function | acyltransferase activity | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0004315 | Molecular Function | 3-oxoacyl-[acyl-carrier-protein] synthase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006633 | Biological Process | fatty acid biosynthetic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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