Detailed information of HOLI00001.G49709 in Hydra oligactis

Genomic Location: HOLI00001:858524...859635
NR annotation: WP_262128559.1, class II histone deacetylase [Pseudomonas sp. 5P_5.1_Bac1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HXM1Histone deacetylase-like amidohydrolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA3774 PE=1 SV=1
Q70I53Histone deacetylase-like amidohydrolase OS=Alcaligenes sp. (strain DSM 11172) OX=242601 GN=hdaH PE=1 SV=3
O30107Probable deacetylase AF_0130 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=AF_0130 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000286FamilyHistone deacetylase familyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan

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