Gene detail

Detailed information of HOLI00001.G50085 in Hydra oligactis

Genomic Location: HOLI00001:1340878...1342653
NR annotation: WP_262130577.1, sensor domain-containing diguanylate cyclase [Pseudomonas sp. 5P_5.1_Bac1]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8X8Q3	Diguanylate cyclase DgcM OS=Escherichia coli O157:H7 OX=83334 GN=dgcM PE=3 SV=2
P77302	Diguanylate cyclase DgcM OS=Escherichia coli (strain K12) OX=83333 GN=dgcM PE=1 SV=2
Q9KKZ4	Diguanylate cyclase VdcA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=vdcA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan
PF02743	dCache_1	Cache domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR029151	Homologous_superfamily	Periplasmic sensor-like domain superfamily	Interproscan
IPR033479	Domain	Double Cache domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan