Gene detail

Detailed information of HOLI00001.G50400 in Hydra oligactis

Genomic Location: HOLI00001:1755730...1758851
NR annotation: WP_196165280.1, bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha [Pseudomonas guariconensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00001.g50400.t1

ATGGGGCCGGGCCTGCCCGGTCAGCGCTCGGCGCTGGTGGCGGCCGACCGGGCGTTCATCGAGCGACTGTGGAACATCGAGGCCGGCAGCCTGCGCGCCGAAGGCGGCGACGGCACCGTGGCAATGTTCGAGCAGATGCGCGCCGGCGAAATCAAGGCCTGCTGGATCATCTGCACCAACCCGGTGGCCAGCGTCGCTGACCGGCAGAGCGTGATCGAAGCACTGCAGGCCGCCGAACTGGTGATTACCCAGGATGCCTACCTCGACACCGAAACCAACCGCTACGCCGACATCCTCCTGCCCGGCGCGCTGTGGGCCGAAGCGCAGGGGGTGATGATCAACTCCGAACGCAACCTCACCCTCATGCAGCCAGCCGCCATGCCACCCGGCGAGACCCTGCCGGACTGGCAACTGATCGCCCGCGTTGCCTGTGCCATGGGCTATCAGGAGGCCTTCGACTACAGCAGCGCCGAACAGGTATTCGAAGAAATCAAACAGGCCTGGAACCCCAAGACCGGCTACGACATTCGCGGCGCCAGCTACTCGCGCCTGCAACGCGGCCCGCTACAATGGCCGTGCGCCGCCGCTGACGCCAGCCCACGCAACCCGATTCGCTACCTGCAGGCCGACGGGCCGCTGTTCGCTACCGAAAACGGCAAGGCGCAGTTCTTCGCCCGGCCCTTTGCCTCGCCCGCCGAGTTGCCCGACGACGATTTTCCCCTGGTGCTCAACACCGGCCGCGTTCAGCACCAATGGCACACGCTGACCAAGACCGGCAAGGTGCCGACCTTGAACAAACTCAACCCCGGCCCGTTCCTCGAGATCCATCCGGTGGATGCCGAGCGCCTCGGCATTGCCGAGCGCAACAGCGTCGAAGTCCGCTCCCGCCGCGGGCGTGCGGTGTTACCTGCGGTGATCACCGACCGCGTGCAACCGGGCAACTGCTTCGCGCCGTTTCACTGGAACGATGTGTTTGGCGAAAACCTCGCGATCAATGCCGTCACCAGCAGCGCCGTGGACCCGATCTCCCTGCAGCCGGCGTTCAAGTTCTGCGCCGTGGCGCTACAACCCGTCGCCACGCCCGCCGCAACGCTACCCCTTCAATCCGCCGCCCCGGAGCCTGCCCCGATGCCGATCGATGCATTCGCCCGCCTGCTCAACCTCGACAGCCCCGTGCAACTGACCCTGAGTGCCGAAGAACAGTGGTACATGCAAGGCTACCTGCTCGGCCTGCGCAACACCGAAGGCGGCCAACCTGGTGTGCCGACACTGCCGGCCAGCGCTCCGCTTGCGGCCGAACGGCGCCTGCTGCTGGACGGCATGCTTGCCGGGCTGTTCTCCCGCAGCGGCAGCGAGCCGGCCGCGGCCCTCGCGGTTCCGGCGCTCAACAGCACGCTCGGCGGCAGCGTCAGCGAGCCCGAGTGGCTGGTGCTCTGGGGCTCGCAGACCGGCACCAGTGAAACCCTTGCCGCCACCTGCGCCGAGCGCCTGAGCAACGCCGGCAGACGCGCACGGCTGCAAGCCATGGACCAGACCGGGCTGGACGACCTGCGCCGCGCCGCTGCGGTGCTGCTGGTCACCAGCACCTTCGGCGACGGCGACCCGCCCGACAACGCCAGCGACTTCTGGAGCAGCCTGCAGAGCGCCGGCGCCCAGGCCCTGGCCAACAGCCGCTTCAGCGTGCTGGCCCTGGGCGATTCGAGTTACCAGCAGTTCTGCGGCTTTGGCCGCAAGCTCGACGAACGCCTCGCCGAACTGGGCGCCGAGCGCCTGCAGCCACGCCTGGAGTGCGAGCCGGACGACCACGGCCCGGCTGACGACTGGCTGAGTGCGCTGAGCAAGCACCTCGCTCCTGCGGCGCAAAGCCTGCCTGCCCCGCAGCCACCGGCCCGACCGGTCGCCAGCAGCTTCAGCCGCAGCAACCCGCTGCGTACCCGGCTCGTGCATAACCAGGTGCTGAATGCACCCGGTGCGGAAAAGGAAACCCGTCATCTGGCGTTCGACCTCAGTGGCCACGACTTTCCTTATCAGGCCGGCGATGCCCTGGGTGTCTGGCCGCGCAACTGCCCCCAACTGGTGGATGAACTGCTGAGCACCCTGAGCCTGGACGGCGACAGCCCGGTGGAAGTGAAAAACCAGCCCGCGATGCCACTGCGCGAGGCGCTGGCCGAACACCTGGAAATCGCCCGCATCACTCCGGACCTGCTGCGCCGGGTGCCGGCCCTGCTGCGCGAGTTCCCGATCCCGCTGGACGCCGCGCAACTGGTGCAACTGCTCAAACCGCTGCAGCCACGCCTGTACTCCATCAGTTCCAGCCCGAACAGCGTGCCGAACGAGGTGCACCTGACGGTCGCCACCGTGCGCTATGCGCATCAAGGCCAGCAGCGCGGCGGCGTGTGTTCGACCTTCCTCGCTGACCGTGCGGACGAGGACGGCGTGCGCATCTTTTTGCAGCCTTCGACCCACTTCCGGACGCCCAAGGACCCGACAACGCCGCTGATCATGATCGGCCCCGGCACCGGTATCGCACCGTTTCGCGCGTTCTTGCAGGAGCGTCAAGCCCAGGGCGGTGGCGGCAAGAACTGGCTGTTCTTCGGCGAGCAACGGGCGCAGAGCGACTTCTACTATCAGGAAGAGCTGCGCGCCTGGCAGGACAGCGGCCTCCTCACCCGCCTGGACACCGCCTTCTCCCGCGATCAGAAGGAAAAAATCTACGTACAACAGCGCATGCTCGAACACGGCGCACGGCTCTGGGAGTGGCTGGAGCAAGGCGCCTGCCTTCTGCGTCTGCGGCGATGCCGCGCGCATGGCCAAAGACGTCGACGCGGCACTGAAGAAAGTCGTCCAGGTCCACGGCAGGATGAGCGCCGGCGCGGCGGCGCTGTATGTCAGTGGCATGAGCAAGGACCGCCGCTACCTGCGCGACGTGTATTGAGCGGCCTTCGGCGCGACCCCGTTCGATCCGGCACACCAATTGCTGGTCACTGTCTGCTGGCCGTCTTCCAACGCTGGAAGCGGCCTCGACTGACATGA

Transcript

HOLI00001.g50400.t1

Protein

Uniprot

Uniprot term	Description
O32214	Sulfite reductase [NADPH] flavoprotein alpha-component OS=Bacillus subtilis (strain 168) OX=224308 GN=cysJ PE=1 SV=1
Q0HFL6	Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain MR-4) OX=60480 GN=cysJ PE=3 SV=1
A0KTH4	Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella sp. (strain ANA-3) OX=94122 GN=cysJ PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00175	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan
PF00258	Flavodoxin_1	Flavodoxin	Domain	Interproscan
PF00384	Molybdopterin	Molybdopterin oxidoreductase	Family	Interproscan
PF01568	Molydop_binding	Molydopterin dinucleotide binding domain	Domain	Interproscan
PF00667	FAD_binding_1	FAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001709	Domain	Flavoprotein pyridine nucleotide cytochrome reductase	Interproscan
IPR001433	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR023173	Homologous_superfamily	NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily	Interproscan
IPR008254	Domain	Flavodoxin/nitric oxide synthase	Interproscan
IPR006656	Domain	Molybdopterin oxidoreductase	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR029039	Homologous_superfamily	Flavoprotein-like superfamily	Interproscan
IPR009010	Homologous_superfamily	Aspartate decarboxylase-like domain superfamily	Interproscan
IPR039261	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR017927	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR006657	Domain	Molybdopterin dinucleotide-binding domain	Interproscan
IPR003097	Domain	Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding	Interproscan
IPR041957	Domain	Nitrate reductase NapA-like, molybdopterin-binding domain	Interproscan
IPR001094	Domain	Flavodoxin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19384	NITRIC OXIDE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0010181	Molecular Function	FMN binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0043546	Molecular Function	molybdopterin cofactor binding	Interproscan