Gene detail

Detailed information of HOLI00001.G50487 in Hydra oligactis

Genomic Location: HOLI00001:1868193...1869536
NR annotation: WP_175650280.1, diguanylate cyclase [Pseudomonas sp. Marseille-P9899]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0AA90	Diguanylate cyclase DosC OS=Escherichia coli O157:H7 OX=83334 GN=dosC PE=3 SV=1
P0AA89	Diguanylate cyclase DosC OS=Escherichia coli (strain K12) OX=83333 GN=dosC PE=1 SV=1
Q320T0	Diguanylate cyclase DosC OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=dosC PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11563	Protoglobin	Protoglobin	Domain	Interproscan
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan
PF21118	DosC_2nd	DosC CZB-like middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000160	Domain	GGDEF domain	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR044398	Domain	Globin-sensor domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR009050	Homologous_superfamily	Globin-like superfamily	Interproscan
IPR012292	Homologous_superfamily	Globin/Protoglobin	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR039435	Domain	Diguanylate cyclase DosC, globin sensor domain	Interproscan
IPR048442	Domain	DosC, CZB-like middle domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan
GO:0019825	Molecular Function	oxygen binding	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13069	E2.7.7.65; diguanylate cyclase	EC:2.7.7.65	Enzymes with EC numbers	-	deepkoala