Gene detail

Detailed information of HOLI00001.G50657 in Hydra oligactis

Genomic Location: HOLI00001:2093473...2095261
NR annotation: WP_095153628.1, ABC transporter ATP-binding protein [Pseudomonas sp. Irchel 3E13]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O31708	Uncharacterized ABC transporter ATP-binding protein YknV OS=Bacillus subtilis (strain 168) OX=224308 GN=yknV PE=3 SV=1
P63398	Fatty acid ABC transporter ATP-binding/permease protein OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB1303C PE=3 SV=1
P9WQJ2	Fatty acid ABC transporter ATP-binding/permease protein OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1310 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0034040	Molecular Function	ATPase-coupled lipid transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala