Detailed information of HOLI00001.G50683 in Hydra oligactis

Genomic Location: HOLI00001:2123836...2126499
NR annotation: WP_262154830.1, MULTISPECIES: DNA polymerase II [unclassified Pseudomonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21189DNA polymerase II OS=Escherichia coli (strain K12) OX=83333 GN=polB PE=1 SV=2
Q7SIG7DNA polymerase OS=Desulfurococcus sp. (strain Tok) OX=108142 GN=pol PE=1 SV=1
P56689DNA polymerase OS=Thermococcus gorgonarius OX=71997 GN=pol PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan
PF21474DNApolII_NDNA polymerase II, N-terminalDomainInterproscan
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR050240FamilyDNA polymerase type-BInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10322DNA POLYMERASE CATALYTIC SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0009432Biological ProcessSOS responseInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02336polB; DNA polymerase IIEC:2.7.7.7
DNA repair and recombination proteinsko03400deepkoala

TOP