Genomic Location: HOLI00001:2127192...2129058
NR annotation: WP_042130256.1, AraC family transcriptional regulator [Pseudomonas japonica]
| CDS |
| HOLI00001.g50685.t1 |
| Transcript |
| HOLI00001.g50685.t1 |
| Protein |
| HOLI00001.G50685 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02311 | AraC_binding | AraC-like ligand binding domain | Domain | Interproscan |
| PF03591 | AzlC | AzlC protein | Family | Interproscan |
| PF12833 | HTH_18 | Helix-turn-helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018060 | Domain | DNA binding HTH domain, AraC-type | Interproscan |
| IPR003313 | Domain | AraC-type arabinose-binding/dimerisation domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR011606 | Family | Branched-chain amino acid transport, permease | Interproscan |
| IPR037923 | Homologous_superfamily | Transcription regulator HTH-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR34979 | INNER MEMBRANE PROTEIN YGAZ | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:1903785 | Biological Process | L-valine transmembrane transport | Interproscan |
