Gene detail

Detailed information of HOLI00001.G50805 in Hydra oligactis

Genomic Location: HOLI00001:2285298...2286461
NR annotation: WP_262130090.1, GGDEF domain-containing protein [Pseudomonas sp. 5P_5.1_Bac1]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A0A0H3AFM6	Diguanylate cyclase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=VC0395_0300 PE=1 SV=1
P77334	Cyclic di-GMP phosphodiesterase PdeR OS=Escherichia coli (strain K12) OX=83333 GN=pdeR PE=1 SV=1
A0A0H2Z7X0	Diguanylate cyclase TpbB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=tpbB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan