Detailed information of HOLI00001.G50837 in Hydra oligactis

Genomic Location: HOLI00001:2319955...2322621
NR annotation: KAF1856162.1, hypothetical protein Lal_00000641 [Lupinus albus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1IBC9Siroheme synthase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=cysG PE=3 SV=1
B1JBD9Siroheme synthase OS=Pseudomonas putida (strain W619) OX=390235 GN=cysG PE=3 SV=1
Q88FT3Siroheme synthase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=cysG PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan
PF13241NAD_binding_7Putative NAD(P)-bindingDomainInterproscan
PF10414CysG_dimeriserSirohaem synthase dimerisation regionDomainInterproscan
PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) MethylasesDomainInterproscan
PF14824Sirohm_synth_MSirohaem biosynthesis protein centralDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR012409FamilySirohaem synthaseInterproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR003043Conserved_siteUroporphiryn-III C-methyltransferase, conserved siteInterproscan
IPR006366DomainUroporphyrin-III C-methyltransferaseInterproscan
IPR035996Homologous_superfamilyTetrapyrrole methylase superfamilyInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR014776Homologous_superfamilyTetrapyrrole methylase, subdomain 2Interproscan
IPR019478DomainSirohaem synthase, dimerisation domainInterproscan
IPR006367DomainSirohaem synthase, N-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR000878DomainTetrapyrrole methylaseInterproscan
IPR037115Homologous_superfamilySirohaem synthase, dimerisation domain superfamilyInterproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR028281DomainSiroheme synthase, central domainInterproscan
IPR014777Homologous_superfamilyTetrapyrrole methylase, subdomain 1Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43697SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0004851Molecular Functionuroporphyrin-III C-methyltransferase activityInterproscan
GO:0009236Biological Processcobalamin biosynthetic processInterproscan
GO:0019354Biological Processsiroheme biosynthetic processInterproscan
GO:0043115Molecular Functionprecorrin-2 dehydrogenase activityInterproscan
GO:0051266Molecular Functionsirohydrochlorin ferrochelatase activityInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0006779Biological Processporphyrin-containing compound biosynthetic processInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

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