Gene detail

Detailed information of HOLI00001.G50858 in Hydra oligactis

Genomic Location: HOLI00001:2347447...2349228
NR annotation: WP_110973220.1, MULTISPECIES: NADH-quinone oxidoreductase subunit C/D [Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B0KMY0	NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas putida (strain GB-1) OX=76869 GN=nuoC PE=3 SV=1
B1J6N2	NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas putida (strain W619) OX=390235 GN=nuoC PE=3 SV=1
A5W190	NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=nuoC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00329	Complex1_30kDa	Respiratory-chain NADH dehydrogenase, 30 Kd subunit	Family	Interproscan
PF00346	Complex1_49kDa	Respiratory-chain NADH dehydrogenase, 49 Kd subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001268	Domain	NADH:ubiquinone oxidoreductase, 30kDa subunit	Interproscan
IPR029014	Homologous_superfamily	[NiFe]-hydrogenase, large subunit	Interproscan
IPR014029	Conserved_site	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site	Interproscan
IPR010218	Family	NADH dehydrogenase, subunit C	Interproscan
IPR022885	Family	NAD(P)H-quinone oxidoreductase subunit D/H	Interproscan
IPR037232	Homologous_superfamily	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	Interproscan
IPR001135	Domain	NADH-quinone oxidoreductase, subunit D	Interproscan
IPR023062	Family	NADH dehydrogenase, subunit CD	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008137	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0016651	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan
GO:0030964	Cellular Component	NADH dehydrogenase complex	Interproscan
GO:0050136	Molecular Function	NADH:ubiquinone reductase (non-electrogenic) activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13378	nuoCD; NADH-quinone oxidoreductase subunit C/D	EC:7.1.1.2	Oxidative phosphorylation	ko00190	deepkoala