Gene detail

Detailed information of HOLI00001.G51018 in Hydra oligactis

Genomic Location: HOLI00001:2568924...2570437
NR annotation: WP_230147462.1, PLP-dependent aminotransferase family protein [Pseudomonas brassicacearum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P49309	Probable rhizopine catabolism regulatory protein MocR OS=Rhizobium meliloti OX=382 GN=mocR PE=3 SV=1
O07578	Uncharacterized HTH-type transcriptional regulator YhdI OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdI PE=3 SV=1
P96669	Uncharacterized HTH-type transcriptional regulator YdeL OS=Bacillus subtilis (strain 168) OX=224308 GN=ydeL PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00392	GntR	Bacterial regulatory proteins, gntR family	Domain	Interproscan
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR000524	Domain	Transcription regulator HTH, GntR	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR051446	Family	HTH-type transcriptional regulator with aminotransferase domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46577	HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00375	K00375; GntR family transcriptional regulator / MocR family aminotransferase	-	Transcription factors	ko03000	deepkoala