Detailed information of HOLI00001.G51069 in Hydra oligactis

Genomic Location: HOLI00001:2634710...2635849
NR annotation: WP_253391713.1, class II histone deacetylase [Pseudomonas citronellolis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HXM1Histone deacetylase-like amidohydrolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA3774 PE=1 SV=1
Q70I53Histone deacetylase-like amidohydrolase OS=Alcaligenes sp. (strain DSM 11172) OX=242601 GN=hdaH PE=1 SV=3
Q2QWU2Histone deacetylase 10, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC10 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR000286FamilyHistone deacetylase familyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04768acuC; acetoin utilization protein AcuC-Carbohydrate metabolism-deepkoala

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