Detailed information of HOLI00001.G51178 in Hydra oligactis

Genomic Location: HOLI00001:2769599...2771501
NR annotation: RWW91277.1, hypothetical protein BHE74_00000195 [Ensete ventricosum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02540Transcriptional activator protein CopR OS=Pseudomonas syringae pv. tomato OX=323 GN=copR PE=1 SV=1
P0AD00Transcriptional regulatory protein CusR OS=Escherichia coli O157:H7 OX=83334 GN=cusR PE=3 SV=1
P0ACZ9Transcriptional regulatory protein CusR OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=cusR PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00512HisKAHis Kinase A (phospho-acceptor) domainDomainInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00672HAMPHAMP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR003661DomainSignal transduction histidine kinase, dimerisation/phosphoacceptor domainInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR003660DomainHAMP domainInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR005467DomainHistidine kinase domainInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR036097Homologous_superfamilySignal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyInterproscan
IPR006290FamilyHeavy metal sensor kinaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan
GO:0004673Molecular Functionprotein histidine kinase activityInterproscan

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